Gene Tmz1t_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3168 
Symbol 
ID7874309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3442838 
End bp3443890 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content69% 
IMG OID643700097 
ProductIntegrase catalytic region 
Protein accessionYP_002890141 
Protein GI237653827 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGCG GCGCCGACGA ACTCGCCCCG ACCCTTGGCA TGGCCGCCGC CTGCCGGGCG 
GTGGGCCTCT GGCGCGGTGC GCCGGGCCGG GCGCGCACAC GCGCGCACCG CGAAGCCCTT
CACGGACCGC ACCCCTGCCG CGCGGCACGG CCCCGTCCGC CGCTGGCGCT CGCACCCCCC
GAGCGGAAGG AACTGCTCGA GGTGCTCAAC AGCGAGCGCT TCTGCGACAC GGCGCCGGCG
GCCATCCACG CCACGCTGCT CGACGAGGGG CGCTATCTGG GCTCGGTGCG CACCATGTAC
CGGGCGCTCG CCGCCGACAG CGGCACGCGC GAACGCCGGC GTCAGCTCAC CCACCCGACT
TACGTCAAAC CGGAGTTGCT GGCCACCGCC CCCAACCAGG TCTGGTCCTG GGACATCACC
AAGCTCAAGG GGCCGGCCAA ATGGACCTGC TTCCACCTCT ACGTGATCCT CGACATCTTC
AGCCGCCAGG TCGTGGGCTG GCTGATCGCC GAACGTGAAA GCGCCGAACT GGCCGAACAG
TTGATCGCCG AGTCCGTGTC CCGCCACGAC ATCGCGCCCG GCACCCTGAC GCTGCACGCC
GATCGCGGCG CCAGCATGCG CTCCAAGCCC GTGGCCGCCT TGCTGGTCGA TCTGGATATC
ACCAAGAGCC ATAGCCGTCC GCACGTCTCG GACGACAATC CCTACTCGGA ATCGCAGTTC
AAGACGATGA AGTACCGCCC GGACTTCCCC GCGCGCTTCG GCAGCCTCGC CGACGCCCGC
GCCCACTGCC AGACCTTCTT CACTTGGTAC AACACCGAGC ACCGGCACTC GGGCATCGGC
TACATGACCC CGAGCAGCGT CCACTATGGC CAGGCGCTCG CCGCTCGTGC GCTCAGACAG
GACGCGCTGG ACGCCGCCTT CTTGGCCAAC CCCAAGCGCT TCAAGGGGCG CCGCCCCGAA
CCCCCAGCGC TGCCGACCGC AGCCTGGATC AACCCACCCG CAACGGAGCA AACCGACGAC
TCGAACACCC CGGCTTCCAC AGTAAATTCA TGA
 
Protein sequence
MMRGADELAP TLGMAAACRA VGLWRGAPGR ARTRAHREAL HGPHPCRAAR PRPPLALAPP 
ERKELLEVLN SERFCDTAPA AIHATLLDEG RYLGSVRTMY RALAADSGTR ERRRQLTHPT
YVKPELLATA PNQVWSWDIT KLKGPAKWTC FHLYVILDIF SRQVVGWLIA ERESAELAEQ
LIAESVSRHD IAPGTLTLHA DRGASMRSKP VAALLVDLDI TKSHSRPHVS DDNPYSESQF
KTMKYRPDFP ARFGSLADAR AHCQTFFTWY NTEHRHSGIG YMTPSSVHYG QALAARALRQ
DALDAAFLAN PKRFKGRRPE PPALPTAAWI NPPATEQTDD SNTPASTVNS