| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3151 |
|---|
| Symbol | |
|---|
| ID | 7874293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3410789 |
|---|
| End bp | 3411907 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643700081 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_002890125 |
|---|
| Protein GI | 237653811 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5433] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.683111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATC TGGACGAAAT CGATGATCCG CGCAAGCCGA GCAACGGCAC CTTGCACGAC
TTCCGGGAGA TCCTGGTGAT CCTGATCGCC GCTGTGCTCT CGGACTGCGA CACGGTCGAG
GACATCACCT TCTGGGCGCG CACCAAGGAG GCGTGGCTGC GCCGCTTCCT CGTGCTCAAG
AACGGCATCC CGTCCGAAGA GACGTTCCTG CGGATCCTGC GTGCGCTCGA TCCGAAGCAG
TTCGAGAACA TGTTCCGGCG CTGGGTGGGC GGCGTGGTCG GTGCGCTCAG CGACGATGCG
GGCCTCGCCG GCACGATCGC AATTGACGGC AAGACCGTGC GCGGCTCGGG CAGCGGCGGC
GAGAGCGCGA TCCACATGGT CAGCGCCTTC GCCACCGAGT TGGGACTGGT GCTCGGCCAG
GAGAAGGTCG CCGCCAAGAG CAACGAGATC ACCGCGATTC CGGAGTTGCT GGAGGCGCTC
TCGATCAAGG GGCTGCTGGT CACGATCGAC GCCATGGGCT GCCAGAAAAG CATTGCCAAA
CAGATCGTTG CGAAGAAAGG CGACTACCTG CTGATGGTCA AGGGCAACCA GCCCAAGCTG
CTCGAAGCGA TCGAGACCGC CTTCATCGAT CAGCACGGCG TCGAGTCGGT CGACCGCAGT
TCGCTGGTCG AGCGCGGCCA CGGCCGCACC GTCGGGCAGA TCGCCTCGGT GCTCTCGGCC
AAGGGCATCG TCGATCTGGC CGACTGGCCC AAGTGCGTGA CGATCGGGCG CATCGACTCG
ATGCGGGTGG TCGGCGACAA GCAATCCGAT CTCGAGCGGC GTTACTACAT CAGTTCGCGC
GCACTGAGCG CCGAGCAACT GGCCGCAGCG ATACGTGCGC ATTGGGGTGT GGAGAACCGG
CTTCATTGGA TCCTCGATGT CAGCTTCAGC GAGGACGCCA GCACGGTGGC CAAGGACAAC
GCGCCGCAGA ACCTTTCGCT GCTGCGCAAG ATCGCGCTCA ACATCATCCG TGCCGACAAG
ACCGACACGC GCAAGAGCAG CCTTCGGCTC AAGCGCAAGG GGGCGGCGTG GGATGACGGG
GTGCGGGAGC GCATGCTGGG GATCCGGGCG ATATGCTAG
|
|---|
| Protein sequence | MSYLDEIDDP RKPSNGTLHD FREILVILIA AVLSDCDTVE DITFWARTKE AWLRRFLVLK
NGIPSEETFL RILRALDPKQ FENMFRRWVG GVVGALSDDA GLAGTIAIDG KTVRGSGSGG
ESAIHMVSAF ATELGLVLGQ EKVAAKSNEI TAIPELLEAL SIKGLLVTID AMGCQKSIAK
QIVAKKGDYL LMVKGNQPKL LEAIETAFID QHGVESVDRS SLVERGHGRT VGQIASVLSA
KGIVDLADWP KCVTIGRIDS MRVVGDKQSD LERRYYISSR ALSAEQLAAA IRAHWGVENR
LHWILDVSFS EDASTVAKDN APQNLSLLRK IALNIIRADK TDTRKSSLRL KRKGAAWDDG
VRERMLGIRA IC
|
|---|
| |