| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3150 |
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| Symbol | |
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| ID | 7874292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3406955 |
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| End bp | 3409957 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643700080 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_002890124 |
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| Protein GI | 237653810 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACTG AATCCAACAC CGTCGAGGCC TACCTGTCCG ACCTCCTGGC GGACTTAGGC
AACCCCCTCG CTAATAAGGC CGAAGAGCCC TCTCCCAACT ACCTCCGCAA GCCAAGGCGC
ACTGGTTGGC ACTTCGCAGC CCCCGCCGAC ATCCCCCGCC AGCCGCATGA GCTCCTCGTC
GAACCCTGGC TGCGCGACGC CCTCATCCGC CTCAACCCCG AAATCGCGGC CCGGCCCGAT
CTGGCCGACG AAGTCCTCTA CAAGCTGCGC GCCATCGTGC TGTCGGTGCG TTCCGACGGC
CTGATCCGCG CCAACGAGGA AATGGCCGCC TGGATGCGCG GCGAACGCTC GATGCCGTTC
GGGCCGAACA ACGAGCATGT GCCGGTGCGG TTGATCGACT TCGACGACCT GGGGCGCAAC
GAATTCGTCC TCACCCGTCA ATTCACCTTC CGCGCTGGCC CCGCAGAGCG CCGCGCCGAC
CTGGTGCTGC TGGTCAATGG CTTGCCGCTG GTGTTGATCG AGGCCAAGAC GCCGGTGAAG
AAGTGCATCA GCTGGGTCGA CGGCGCGCTG CAGGTGCATG AGGACTACGA GAAGTTCGTC
CCCGAGCTGT TCGTGTGCAA CGTGTTCTCG GTGGCGACCG AGGGCAAGGA GTTCCGCTAC
GGCTCGATCG GCCTGCCGGT GAAGGACTGG GGGCCGTGGA ACCTGGATGG CGAGGCGGAC
GATGCGCGCG GCCAGACGCA TCCGCTCAAG TCGCTGCGGC AGTCGGTGGA GAGCATGCTG
CGTCCGCAGG TGGTGCTCGA CATCCTCGCC AGCTTCACGC TGTTCGCCAC CGACAAGAAG
AAGCGCCGCA TCAAGATCAT CTGCCGCTAC CAGCAATACG AGGCGGCCAA CAAGATCGTC
GAGCGCGTGC TGGCGGGCCA GCCGAAGAAG GGCCTGATCT GGCACTTCCA GGGTTCGGGC
AAGTCGCTGC TGATGGTGTT CGCGGCGCAG AAGCTGCGCA TGCACCCGCG GCTGAAGAAC
CCCACGGTGC TGATCGTGGT GGACCGCATC GACCTTGATA CCCAGATCAC CGGCACCTTC
ACCGGCGCCG ACATCCCCAA CCTGGAAAAG GCCGACTCGC GCGAGAAGCT GCAGCAACTG
CTGGCGCAGG ACGTGCGCAA GATCATCATC ACGACGATCT TCAAGTTCGG CGAAACGCCA
AACGGGAAAG CCGGGGCGCT GAACGAGCGC AGCAACATCA TCGCCCTGGT CGACGAGGCG
CACCGCACCC AGGAAGGCGA CCTCGGCCGC AAGATGCGCG AGGCGCTGCC CAATGCCTTC
CTGTTCGGCC TCACCGGCAC CCCGATCAAC CGCGCCGACC GCAACACCTT CTACGCCTTC
GGCGCCGACG AGGACGAGAA GGGCTACCTG AGCCGCTACG GCTTCGAGGA GTCGATCCGC
GACGGCGCCA CGCTGCGGTT GCACTTCGAG CCGCGGCTGG TGGACCTGCA CATCGACAAG
GCCGCGATCG ACGAGGCCTA CAAGGACCTG ACCGGCGGCC TGTCCGACCT CGACCGCGAC
AACCTCGCCA AGACCGCCGC CAAGATGGCG GTGCTGGTGA AGACGCCCGA GCGCATCCGC
CGCATCTGCG AGGACATCGT CCAGCACTAC CAGAGCAAGG TCGAGCCCAA CGGCTTCAAG
GGCCAGGTCG TCACCTTCGA TCGCGAGTCC TGCCTGCTGT TCAAGGCCGA GCTCGACAAG
CTGCTGCCCA CCGAGGCGAC CGACATCGTC ATGTCGGTGC AGCCGGGCGA CCGCAAGGAG
CGTCCCGAAT ACGCCCGCTA CGACCGTAGC CGCGACGAGG AAGAGCGCCT GCTCGACCGC
TTTCGCGACC CGGCCGACCC GCTCAAGCTG ATCATCGTCA CCGCCAAGCT GCTCACCGGC
TTCGACGCCC CCATCCTGCA GGCGATTTAC CTCGACAAGC CGCTGCGCGA CCACACGCTG
CTGCAGGCGA TCTGCCGGGT GAACCGCACC TATTCCGAGC AGAAGACGCA CGGCCTCGTC
GTCGATTACC TGGGCATCTT CGACGACGTG GCTGCCGCCC TGGAGTTCGA CGACCAGAGC
GTGAAGCAGG TCATCAGCAA CATCCAGGAG CTGAAGGACA AGCTGCCCGA GGCAATGCAG
AAATGCCTCG CCTTTTTCCC CGGCGTCGAC CGCAGCCAGC AAGGCTACGA AGGCTTGATC
GCCGCCCAGC AGTGCCTGCC GAACAACGAC ACCCGCGACG CCTTCGCCGC GGAATACAGC
GTGCTCGCGC GCATCTGGGA AGCACTGTCG CCCGACCCGC TGCTTGGACA GTACGAGACC
GACTACAAGT GGCTGTCGCA GATCTACCAG TCGGTGCAGC CGTCGAGCGG CCACGGCAAG
CTGATCTGGC ATTCGCTCGG CGCCAAGACC ATCGAGCTGA TCCACCAGAA CGTGCATGTC
GACGCCATCC GCGACGACCT CGACACCTTG GTGCTCGACG CCGACCTGCT CGAGGCCGTG
CTGTCGAACC CTGACCCGAA GAAGGCGAAG GAACTCGAGA TCAAGCTCAA CCGCCGGCTG
CGCAAGCACC AGGGCAATCC GAAGTTCAAG GATCTATCCG AGCGGCTGGA TGCGCTCAAG
GAGCGCTTCG AGTCCGGCCA GATCAACAGC GTCGACTTCC TCAAGCAGCT GCTGCAGATC
GCCAAGGAAA CCCTGCAGGC TGAAAGGGAG ACCCCTCCCG AGGAAGACGA GGACCGCGGC
AAGGCCGCGC TGACCGCGCT ATTCAACGAG GTGAAGACCC CCGAGACGCC GATCATCGTC
GAGCGCGTGG TGACGGACAT CGACGAGATC GTGCGCCTGG TGCGCTTCCC GGGATGGCAG
GGGACGCAGG CGGGGGAACG GGAGGTGAAG AAGGCGCTGC GGAAGGCCTT GTTCAAGTAC
AAGCTGCACG CGGACGAAGA GCTGTTCGAG AAGGCGTTCA GTTATATCCG GCAGTATTAC
TGA
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| Protein sequence | MFTESNTVEA YLSDLLADLG NPLANKAEEP SPNYLRKPRR TGWHFAAPAD IPRQPHELLV
EPWLRDALIR LNPEIAARPD LADEVLYKLR AIVLSVRSDG LIRANEEMAA WMRGERSMPF
GPNNEHVPVR LIDFDDLGRN EFVLTRQFTF RAGPAERRAD LVLLVNGLPL VLIEAKTPVK
KCISWVDGAL QVHEDYEKFV PELFVCNVFS VATEGKEFRY GSIGLPVKDW GPWNLDGEAD
DARGQTHPLK SLRQSVESML RPQVVLDILA SFTLFATDKK KRRIKIICRY QQYEAANKIV
ERVLAGQPKK GLIWHFQGSG KSLLMVFAAQ KLRMHPRLKN PTVLIVVDRI DLDTQITGTF
TGADIPNLEK ADSREKLQQL LAQDVRKIII TTIFKFGETP NGKAGALNER SNIIALVDEA
HRTQEGDLGR KMREALPNAF LFGLTGTPIN RADRNTFYAF GADEDEKGYL SRYGFEESIR
DGATLRLHFE PRLVDLHIDK AAIDEAYKDL TGGLSDLDRD NLAKTAAKMA VLVKTPERIR
RICEDIVQHY QSKVEPNGFK GQVVTFDRES CLLFKAELDK LLPTEATDIV MSVQPGDRKE
RPEYARYDRS RDEEERLLDR FRDPADPLKL IIVTAKLLTG FDAPILQAIY LDKPLRDHTL
LQAICRVNRT YSEQKTHGLV VDYLGIFDDV AAALEFDDQS VKQVISNIQE LKDKLPEAMQ
KCLAFFPGVD RSQQGYEGLI AAQQCLPNND TRDAFAAEYS VLARIWEALS PDPLLGQYET
DYKWLSQIYQ SVQPSSGHGK LIWHSLGAKT IELIHQNVHV DAIRDDLDTL VLDADLLEAV
LSNPDPKKAK ELEIKLNRRL RKHQGNPKFK DLSERLDALK ERFESGQINS VDFLKQLLQI
AKETLQAERE TPPEEDEDRG KAALTALFNE VKTPETPIIV ERVVTDIDEI VRLVRFPGWQ
GTQAGEREVK KALRKALFKY KLHADEELFE KAFSYIRQYY
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