Gene Tmz1t_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3145 
Symbol 
ID7874287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3402807 
End bp3403721 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID643700075 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002890119 
Protein GI237653805 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.243267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGCG CGCTGTACTC CCGCGCCGGC TCGCATGCCG GCGTCGGTCT CCTCCTCCTG 
GTGTTGTTCT TCCTGTATGC CGAGCGGGCG TTCGGGTTGC TGCCGGCCGA TCATGCCGTG
CAGGCCTGGC TCGATCCGGT GCGCAATGCG GCGCTCGCGC TCGCCCTGTT CACCGGCGCG
CATCTGCTGC ACGCGCTCGC GTCGGCGCGG CTGTCGCAGC GGCGCAAGGG GCGCAAGCCG
GTGCCCAAGG TGCTGCTGGA CCTGCTGCGG GTGTTCCTGT TCGCGCTGGC GGCGCTGGGC
GGGCTGTCGC TGCTGTTCCG CCAGGACCTG TCGGGGATCC TGACCGGCTC GGGCCTGGTG
CTGGCGGTGC TGGGCTTCGC GATCCGCAAC GTGGTGGCCG ACACGCTGTC GGGGATCGCG
CTCGGGATCG AGGCGCCGTT CCGCATCGGC GACTGGGTGC GCATCGAAAA CCTGGCCCAG
GGGCGGGTGC AGGAGATCGG CTGGCGCACG ACGCGGCTGG TGACCGGGGA CAGCACCTAC
GTGATCCTGC CCAACAGCCA GATCTCGCGG CAGCGGATCA CCAATTTCAG CGCGCCGAAG
AAGGAATATC GCGACCATGC CGAGCTCACC CTGCCGGTCG CGCTGCCGGT GGCCGAGGCG
CGGGAGCTGA TGCGCGCGGC GCTGACGCAT GCGGCGAGCA TCGCCGAGGA CAAGCCGCCC
GAGGTGCAGC TGGTGTCCTA TGGCCCTGGG GGCATCACCT ATCGGGTGAA GTACTGGGTG
CCGCAGCACG ACCGCGAGCC GGTCTGCCGC GACGAGGTGC TCGGGCTCGT CGATGCGGCG
CTGCGTGCGC GCGGGGTCGT GCTGGCGCAG CCGCTGGCGG TGTCCGCGTG CCAACATGCG
GAAGCCGCGT CCTAG
 
Protein sequence
MVRALYSRAG SHAGVGLLLL VLFFLYAERA FGLLPADHAV QAWLDPVRNA ALALALFTGA 
HLLHALASAR LSQRRKGRKP VPKVLLDLLR VFLFALAALG GLSLLFRQDL SGILTGSGLV
LAVLGFAIRN VVADTLSGIA LGIEAPFRIG DWVRIENLAQ GRVQEIGWRT TRLVTGDSTY
VILPNSQISR QRITNFSAPK KEYRDHAELT LPVALPVAEA RELMRAALTH AASIAEDKPP
EVQLVSYGPG GITYRVKYWV PQHDREPVCR DEVLGLVDAA LRARGVVLAQ PLAVSACQHA
EAAS