Gene Tmz1t_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3135 
Symbol 
ID7874277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3391230 
End bp3392417 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID643700063 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002890109 
Protein GI237653795 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGGAA AGGACAGGAA GCTGCGCCTC GCAGTGAGCG CGCTCGGGCT CGGCCTGGGC 
ATGTTGCTGG CGCAGGGCGC GGCGGAGGCG GCGGACAAGG TCAAGGTGGG GCTGATGCTG
CCCTACACGG GCACCTACGC CTCGCTCGGC AACGCGATCA CCAACGGCTT CAAGCAGTAC
GTGGCGGAGC AGGGCGGCAA GCTCGGCGGT CGCGAGGTCG AGTATTTCGT CGTCGATGAC
GAGTCCGATC CGGCCAAGGC GACCGAGAAT GCCAACAAGC TGGTCAAACG CGACAACGTC
GACGTGCTGG TCGGCACCGT GCATTCGGGC GTGGCGCTGG CGATGGCCAA GGTCGCGCGT
GACTCCAAGA CCCTGATGAT CATCCCGAAC GCGGGCGCGG ACGAGCTTAC CGGTCCGCTG
TGCGCGCCGA ATGTGTTCCG CACCTCGTTC TCGGCCTGGC AGCCGGCGAA TGCGATGGGC
AAGGTGGTCG CCGAACGCGG CCACAAGAAC GTGGTCACCC TGGCCTGGAA GTACTCCTTC
GGCGAACAGT CGGTCGCCGG CTTCAAGGAG TCCTTCGAGC AGGCCGGCGG CAAGGTGGTC
AAGGAGCTCT ACCTGCCCTT CCCGAACGTG GAGTTCCAGC CCTTCCTGAC CGAGATCGCC
AACCTCAGGC CGGATGCGGT GTTCGTATTC TTCTCCGGCG CCGGGGCGGC GAAGTTCGTC
AAGGACTACG AGGCGGCAGG CCTGAAGGCG GGCCTCCCGC TCTACGCCCC GGGCTTCCTC
ACCGACGGCA CGCTGGAGGC CATGGGCGGC GCCGGCGAGG GCGTGCTGAC CACGCTGCAC
TACGCCGACG GCCTCGACAA CGCCAGGGAG AAGTCCTTCC GCAGCGGCTA TGTCGCGGCC
TACAAGGCGC AACCCGACGT CTTCGCGGTG CAGGGCTACG ACAGTGCGCA GCTGCTCGCC
GCGGGGCTCT CGGGCGCGCC GGCCGGAGCC TTCGACAAGG AGGCGGTCAT GAAGGCGATG
AGCGCCGCCA CCATCGACAG TCCGCGCGGT AGCTTCACCC TGTCCAAGGC CAACAACCCG
GTGCAGGACA TCTACCTGCG CAAGGTCGAG GGCGGGCAGA ACAAGGTGAT CGGCGTCGCC
GCACCCAAGC TCGCCGACCC GGCGCGCGGC TGCAAGCTCA TGAACTGA
 
Protein sequence
MVGKDRKLRL AVSALGLGLG MLLAQGAAEA ADKVKVGLML PYTGTYASLG NAITNGFKQY 
VAEQGGKLGG REVEYFVVDD ESDPAKATEN ANKLVKRDNV DVLVGTVHSG VALAMAKVAR
DSKTLMIIPN AGADELTGPL CAPNVFRTSF SAWQPANAMG KVVAERGHKN VVTLAWKYSF
GEQSVAGFKE SFEQAGGKVV KELYLPFPNV EFQPFLTEIA NLRPDAVFVF FSGAGAAKFV
KDYEAAGLKA GLPLYAPGFL TDGTLEAMGG AGEGVLTTLH YADGLDNARE KSFRSGYVAA
YKAQPDVFAV QGYDSAQLLA AGLSGAPAGA FDKEAVMKAM SAATIDSPRG SFTLSKANNP
VQDIYLRKVE GGQNKVIGVA APKLADPARG CKLMN