| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3133 |
|---|
| Symbol | |
|---|
| ID | 7874275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3389277 |
|---|
| End bp | 3390245 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643700061 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002890107 |
|---|
| Protein GI | 237653793 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC GAGTCGTGCT GTCTTTCAAG CTCGCCGTGC TGGCAGGGCT GGTGCTGTTT
CCGGCGATCG GATCCAGCTT CTATGTCGAG TTGGTGGCGA AAATCCTCGT GATGTCGATC
TTCGCGATGA GCCTGGCGCT GCTGGTCGGC TTCACCGGCC TGGTGAGCCT CGGCCATGCC
GCATATTTCG GCATCGCCGC CTACACGGTC GCGCTGATCG CGCCCGAATA CGAGGCGGCC
AACCTGTGGT TCGTGCTCGC GGCCTCGGTG CTGGCGGCAG GCGCCGCGGC GTTCTTCATC
GGGCTGTTCG TGCTGCGCAC CAAGGGCATC TATTTCATCA TGGTGACGCT GGCCTTCGCG
CAGATGGCCT ACTACATCTT CCACGACACC GCACTCGGGC GCAGCTCGGA CGGCATCTAT
CTCAACGTCA AGCCGGATGC CAGCCTCTTC GGCTGGATGC CGTTCAACCT CGACGAGCCG
CTGCACCTGT ACTACTTCAT CCTCGCCGCG ATGGTGGCGG TGTTCGTGCT GCTGGCCTTC
GTGCTGCGCT CGCCCTTCGG TCGCGTGCTC GCCGGCATCC ACAGCAACGA GCACCGCATG
AAGTCGCTCG GCTACGCCAC GCAGCGCTAC AAGCTTGCGG CCTTCACCCT GGCCGGTGCG
CTGGCCGGGG TGGCGGGCTT CCTGTACGCG GTGCTGTTCG GCTTCGTGAC CCCCGATTAC
CTGTCGTGGC ATCAGTCGGG CAACGTGTTG CTGATGGTCA TCCTCGGCGG CCTCGGCAGC
CTGGCGGGGG CGGTCGCGGG CGCGTTCGCC TTCATCGGCC TGCAGGAGAT GTTCTCGGAC
TGGACCAAGC ACTGGCAACT GCTGATGGGC CTGGTGATCG TCGCCGCGGT GCTGTTCATG
CCGAGTGGAC TGGCCGGACT GCCGCGACGC ATCTTCCGCA CGGTCAATTG GGGAGAAGAC
GATGAGTGA
|
|---|
| Protein sequence | MNPRVVLSFK LAVLAGLVLF PAIGSSFYVE LVAKILVMSI FAMSLALLVG FTGLVSLGHA
AYFGIAAYTV ALIAPEYEAA NLWFVLAASV LAAGAAAFFI GLFVLRTKGI YFIMVTLAFA
QMAYYIFHDT ALGRSSDGIY LNVKPDASLF GWMPFNLDEP LHLYYFILAA MVAVFVLLAF
VLRSPFGRVL AGIHSNEHRM KSLGYATQRY KLAAFTLAGA LAGVAGFLYA VLFGFVTPDY
LSWHQSGNVL LMVILGGLGS LAGAVAGAFA FIGLQEMFSD WTKHWQLLMG LVIVAAVLFM
PSGLAGLPRR IFRTVNWGED DE
|
|---|
| |