| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3123 |
|---|
| Symbol | |
|---|
| ID | 7874265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3379108 |
|---|
| End bp | 3379848 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643700051 |
|---|
| Product | acetoacetyl-CoA reductase |
|---|
| Protein accession | YP_002890097 |
|---|
| Protein GI | 237653783 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG TTGCACTGGT AACCGGCGGC ATGGGCGGTC TCGGCGAGGC GATCTGCATC
AAGCTGGCCG CGCTCGGCTA CAAGGTGGTG ACGACCCATT CCCCGGGCAA CACCAAGGCC
CAGGAGTGGC TGCAGACCAT GAACAACATG GGCTACGGCT TCAAGGCCGT TCCCTGCGAC
GTGGCGGATT TCGACTCGTG CAAGGCCTGC GTCGAGCAAG TGGTCAAGGA GGTCGGTCCG
GTCGACGTGC TGGTCAACAA CGCCGGCATC ACCCGCGACA TGACCTTCAA GAAGATGACC
AAGGCCGACT GGGATGCGGT CATCAGCACC AACCTCGACT CCGCCTTCAA CATGACCAAG
CAGGTCATGG ACGGCATGGT CGAGCGCAAG TGGGGCCGCG TGATCAACGT GTCCTCGGTC
AACGGCCAGA AGGGCGCCTT CGGCCAGACC AACTACGCCG CGGCCAAGGC CGGCATGCAC
GGTTTCACCA AGGCGCTGGC GCTGGAAGTG GCGCGTAACG GCGTCACCGT CAACACCATC
TCGCCGGGCT ACATCGGCAC CAAGATGGTG ATGGCGATCC CGCAGGAGAT CCTCGACTCC
AAGATCCTGC CGCAGATCCC GGTGTCTCGC CTGGGCAAGC CGGAAGAGAT CGCCGGCCTG
GTGGCCTACC TGTCCTCCGA CGAGGCGGCC TTCGTGACCG GTGCCAACAT CTCGATCAAC
GGCGGCCAGC ACATGTTCTG A
|
|---|
| Protein sequence | MARVALVTGG MGGLGEAICI KLAALGYKVV TTHSPGNTKA QEWLQTMNNM GYGFKAVPCD
VADFDSCKAC VEQVVKEVGP VDVLVNNAGI TRDMTFKKMT KADWDAVIST NLDSAFNMTK
QVMDGMVERK WGRVINVSSV NGQKGAFGQT NYAAAKAGMH GFTKALALEV ARNGVTVNTI
SPGYIGTKMV MAIPQEILDS KILPQIPVSR LGKPEEIAGL VAYLSSDEAA FVTGANISIN
GGQHMF
|
|---|
| |