Gene Tmz1t_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3122 
Symbol 
ID7874264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3378129 
End bp3378869 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID643700050 
Productacetoacetyl-CoA reductase 
Protein accessionYP_002890096 
Protein GI237653782 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.868541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGA AAATCGCTCT TGTCACCGGC GCCATGGGTG GTCTCGGTAC GGCGATCTGC 
CAGTCGCTTG CCAAGGACGG CTTCAAGGTC GTGGCCAACT GCCTGCCGAA CTTCGAGCTA
AAGGACGCCT GGCTGTCCGC CCAGCGCGAC CTCGGCTTCG ACTTCGCCGC CGCCGAAGGC
GACGTGTCGA ACTACGAGTC GTGCGCGGCG ATGGTCGCCA AGATCGAAGC CGACGTCGGT
CCGATCGATG TGCTGGTGAA CAACGCCGGC ATCACCCGCG ACAAGTTCTT CCCCAAGATG
GAGAAGGGCC AGTGGGATGC GGTGATCAAC ACCAATCTGA ACAGCCTGTT CAACGTCACC
CACCACGTCT CTGCGAAGAT GGCCGAGCGC GGCTGGGGTC GCATCATCAA CATCTCTTCG
GTCAATGGCG TCAAGGGTCA GGCGGGCCAG ACCAACTACT CGACCGCCAA GGCCGGCGTG
CTGGGCTTCA CCAAGGCGCT CGCCGCCGAG CTGGCGACCA AGGGTGTGAC GGTCAACGCG
ATCGCCCCGG GCTACATCGG TACCGACATG GTGATGGCGA TCCGCGAAGA CATCCGCCAG
GGCATCATCG ACACCGTGCC GATGAAGCGC CTCGGCCGTC CGGACGAGAT CGGCGACCTG
TGCGCCTACC TCGCCTCCGA CAAGGCTGCC TACATCACCG GGGCGACCAT CAACATCAAC
GGTGGCCTGC ACATGTGCTG A
 
Protein sequence
MSKKIALVTG AMGGLGTAIC QSLAKDGFKV VANCLPNFEL KDAWLSAQRD LGFDFAAAEG 
DVSNYESCAA MVAKIEADVG PIDVLVNNAG ITRDKFFPKM EKGQWDAVIN TNLNSLFNVT
HHVSAKMAER GWGRIINISS VNGVKGQAGQ TNYSTAKAGV LGFTKALAAE LATKGVTVNA
IAPGYIGTDM VMAIREDIRQ GIIDTVPMKR LGRPDEIGDL CAYLASDKAA YITGATININ
GGLHMC