| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3099 |
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| Symbol | benD |
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| ID | 7874569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3355578 |
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| End bp | 3356354 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643700022 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_002890074 |
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| Protein GI | 237653760 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.763033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAACC GTTTCAAGAA GAAAGTGGCC GTCATCACCG GCGCCGCGCA GGGCATCGGC
AAGCGCGTCG CCGAGAAGAT GGCCAAGGAG AAGGGCACCC TGGTGCTGGT CGACCGCTCC
GAGCTCGTGC ATGAGGTGGC CAAGGAGCTG TCCGGCAAGG TCGAAGTCCT CAGCCTCACC
GCCGACCTGG AGAAGTTCGC CGACTGCAAG CGGGTCATGG AGGCCGCGGT CGAGAAGTTC
GGCCGCATCG ACATCCTGAT CAACAACGTC GGCGGCACGA TCTGGACCAA GCCCTTCGAG
CACTACGAGG AGGACGAGAT CGAGGCCGAG GTGCGGCGCT CGCTCTTCCC CACGCTGTGG
TGCTGCCGCG CCGCCCTGCC CTACATGCAG GAACAGGGCA AGGGTGCGAT CGTGAACGTG
TCCTCGATCG CCACCCGCGG CGTCAACCGC GTGCCCTACG GCGCGGCCAA GGGCGGCGTC
AATGCGCTCA CCGCCTGCCT GGCGTTCGAG AACGCCGAGC GCGGCATCCG CGTCAATGCC
ACCGCGCCCG GCGCCACCGA GGCCCCGCCG CGTCTGATCC CGCGCAACAC CAAGGAACAG
AGCGAGCAGG AGAAGCTCTG GTACAAGCAG ATCTACACCC AGTCGATCGA CAGCAGCCTG
ATGAAGCGCT ACGGCACGCT CGACGAGCAG GCCGACCCGA TCCTGTTCCT CGCCTCCGAC
GACGCCGCCT ACATCACCGG CACCATCGTG CCGGTGGGCG GTGGCGACCT GGGCTGA
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| Protein sequence | MANRFKKKVA VITGAAQGIG KRVAEKMAKE KGTLVLVDRS ELVHEVAKEL SGKVEVLSLT
ADLEKFADCK RVMEAAVEKF GRIDILINNV GGTIWTKPFE HYEEDEIEAE VRRSLFPTLW
CCRAALPYMQ EQGKGAIVNV SSIATRGVNR VPYGAAKGGV NALTACLAFE NAERGIRVNA
TAPGATEAPP RLIPRNTKEQ SEQEKLWYKQ IYTQSIDSSL MKRYGTLDEQ ADPILFLASD
DAAYITGTIV PVGGGDLG
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