| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3074 |
|---|
| Symbol | |
|---|
| ID | 7874544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3328327 |
|---|
| End bp | 3329457 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643699997 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_002890049 |
|---|
| Protein GI | 237653735 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCA ACACCCTCGG CACGCTCTTC ACCGTCACCT CCTTCGGGGA ATCCCACGGC
CCGGCGATCG GCTGCATCGT CGATGGCTGC CCGCCGGGAC TGGCGATCTG CGAGGCAGAC
ATCCAGGCCG AGCTCGACCG CCGCAAGCCG GGCACCTCGC GCCACGTCAC CCAGCGCCGC
GAGCCCGACA CCGTCGAGAT CCTCTCCGGC GTGTTCGAGG GCGTCACCAC CGGCACCCCG
ATCTCGCTGC TGATCCGCAA CCAGGACCAG CGCAGCAAGG ACTACGGCAA CATCGCCGAC
ACCTTCCGCC CCGGCCACGC CGACTACGCC TACCTGCAGA AGTACGGCCT GCGCGACCAT
CGTGGCGGCG GGCGCTCGTC GGCGCGCGAG ACCGCGGTGC GGGTGGCGGC CGGCGCGATC
GCGAAGAAGT GGCTGAAGGA GCGCCACGGC ATCGTCATCC GCGCCTGCAT GGGTGCGCTC
GGCCCGATCG AGATTCCCTT CGTGTCCTGG GACGAGGTCG ACGGCAACCC CTTCTTCGCG
CCCAACGCCG CGATCGTGCC CGAGCTCGAG GCCTTCATGG ACGCGCTGCG CAAGTCGGGC
GACTCGATCG GCGCGCGCAT CGACGTGGTC GCCAGCGGCG TCCCGGTCGG CTGGGGCGAG
CCGGTGTATG GCCGCCTGGA CGCCGACATC GCCTATGCGA TGATGGGCAT CAACGCGGTC
AAGGGCGTGG AGATCGGCGC CGGGTTCAAG TCGGTCGCGC AGCGCGGCAC CGAGCACGGC
GACGAGATGA CGCCCGCGGG CTTCCTGTCC AATCATGCGG GCGGCGTGCT CGGTGGCATC
TCCACCGGGC AGGACATTCT CGCCAGCATC GCGATCAAGC CGACCTCGAG CATCCGCCTC
GAGCGTCGCT CGATCGACCG CGCAGGCAAT CCCGTCATGG TCGCCACCGA GGGTCGCCAC
GACCCCTGCG TGGGCATCCG CGCGACGCCG ATCGCCGAAT CCATGCTCGC ACTGGTGCTG
ATCGACCACG CGCTGCGCCA TCGCGCGCAG TGCGGCGACG TGCGCACCGA CACCCCGCGC
ATCCCGGCGC TCGCGCCCGC AGGGAGCCAG CGCCTGCCTT CGCCGCGCTG A
|
|---|
| Protein sequence | MSGNTLGTLF TVTSFGESHG PAIGCIVDGC PPGLAICEAD IQAELDRRKP GTSRHVTQRR
EPDTVEILSG VFEGVTTGTP ISLLIRNQDQ RSKDYGNIAD TFRPGHADYA YLQKYGLRDH
RGGGRSSARE TAVRVAAGAI AKKWLKERHG IVIRACMGAL GPIEIPFVSW DEVDGNPFFA
PNAAIVPELE AFMDALRKSG DSIGARIDVV ASGVPVGWGE PVYGRLDADI AYAMMGINAV
KGVEIGAGFK SVAQRGTEHG DEMTPAGFLS NHAGGVLGGI STGQDILASI AIKPTSSIRL
ERRSIDRAGN PVMVATEGRH DPCVGIRATP IAESMLALVL IDHALRHRAQ CGDVRTDTPR
IPALAPAGSQ RLPSPR
|
|---|
| |