Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3069 |
Symbol | leuD |
ID | 7874539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3323969 |
End bp | 3324607 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643699992 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_002890044 |
Protein GI | 237653730 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGT TTACCCAGCT CGACGGGCTG GTCGCGCCGC TCGACCGCGC CAACGTCGAT ACCGACGCGA TCATCCCCAA GCAGTTCCTC AAGTCGATCA AGCGCAGCGG CTTCGGCCCC AACGCCTTCG ACGAGTGGCG CTACCTCGAC GTCGGCCAGC CCGGCGCGGA CAACAGCAAG CGTCCGCTCA ACCCCGACTT CGTGCTCAAC CAGGCGCGCT ACCAGGGCGC GCAGATCCTC CTCACCCGCG ACAACTTCGG TTGCGGCAGC TCGCGCGAGC ACGCGCCGTG GGCGCTCGAG GACTACGGCT TTCGCGTGCT GATCGGGCCG AGCTTCGCTG ACATCTTCTT CAACAACAGC TTCAAGAACG GCCTGCTGCC GATCAAGCTG GATGCCGCAG AGGTCGACGA GCTGTTCCGC CAGTGCGAGG CCAGCGCGGG CTACCGCCTG AAGGTCGACC TCGCCGCGCA GACGATCACC CGCCCGGACG GCAAGTCGAT CGCCTTCGAC ATCGACCCCT TCCGCAAGGA ATGCCTGCTC AACGGCTGGG ACGACATCGG CCTCACGCTG CGCCACGCCG ACAAGATCCG CGCCTTTGAA GAGCAGCGCC GCGCCCAACA CCCTTATTAC TTTGCCTGA
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Protein sequence | MKPFTQLDGL VAPLDRANVD TDAIIPKQFL KSIKRSGFGP NAFDEWRYLD VGQPGADNSK RPLNPDFVLN QARYQGAQIL LTRDNFGCGS SREHAPWALE DYGFRVLIGP SFADIFFNNS FKNGLLPIKL DAAEVDELFR QCEASAGYRL KVDLAAQTIT RPDGKSIAFD IDPFRKECLL NGWDDIGLTL RHADKIRAFE EQRRAQHPYY FA
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