Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3068 |
Symbol | |
ID | 7874538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3322868 |
End bp | 3323932 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643699991 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_002890043 |
Protein GI | 237653729 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.787339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTT GCGTGCTGCC GGGTGACGGC ATCGGCCCCG AGATCATGGC GCAGGCCGTG CGCGTGCTGA ACGCGCTCGA TCTCCAGTTC GAGATGGAAG AGGCCCTGGT GGGCGGCTGC GCTGTGGATG CCACCGGCAA TCCGCTGCCC GAGGCCACCC TCCAGCTGGC GCGCGCAGCC GACGCCATCC TGCTCGGCGC GGTCGGCGGC CCGAAGTGGG ACAGCCACCC GCGCAACCAG CGCCCCGAGC TCGGTCTGCT CGGCATCCGC AAGGAGCTGG CCCTGTTCGC CAACCTGCGC CCCGCGATCC TGTATCCGGA ACTGGCCAAC GCCTCGACGC TCAAGCCCGA GATCGTCGCC GGCCTGGACA TCCTGATCGT GCGCGAACTG ACCGGCGACA TCTACTTCGG CCAGCCGCGC GGCATCGAGC TGCGCGAGGT CAATGGCGAA TCGCAGCGCG TCGGCTGGAA CACCATGATC TATGCCGAGT ACGAGATCCG CCGCATCCTG CGCGTGGCCT TCGAGGCCGC GATGAAGCGC GGCAAGCGCC TGTGCTCGGT CGACAAGATG AACGTGCTCG AGACCACCCA GCTGTGGCGC GACATCGCGA TCGAGGTGAG CAAGGAGTTC CCCGAGGTCG AGCTCACCCA CATGCTGGTC GACAACGCCG CGATGCAGTT GGTGCGCAAC CCCAAGCAGT TCGACGTGAT GGTCACCGGC AACATGTTCG GCGACATCCT GTCCGACGAG GCCTCGATGC TCACCGGCTC GATCGGCATG CTGCCTTCGG CCTCGCTCAA CGCCGACAAC AAGGGCATGT ACGAGCCCTC GCACGGCTCC GCGCCCGACA TCGCCGGCAA GGATCTCGCC AACCCGCTCG CCACCATCCT GTCGGCGGCG ATGATGCTGC GCTATACCTT CAACCAGGAG GCCGCTGCCC AGCGCATCGA GCGCGCGGTC AAGAAGGTGC TGGCCCAGGG CTATCGTACC GGCGACATCT ACGAGCCGGG CACGAAGCGC GTCGGCACCC GCGAGATGGG CGACGCCGTG CTCGCAGCGC TGTAA
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Protein sequence | MKICVLPGDG IGPEIMAQAV RVLNALDLQF EMEEALVGGC AVDATGNPLP EATLQLARAA DAILLGAVGG PKWDSHPRNQ RPELGLLGIR KELALFANLR PAILYPELAN ASTLKPEIVA GLDILIVREL TGDIYFGQPR GIELREVNGE SQRVGWNTMI YAEYEIRRIL RVAFEAAMKR GKRLCSVDKM NVLETTQLWR DIAIEVSKEF PEVELTHMLV DNAAMQLVRN PKQFDVMVTG NMFGDILSDE ASMLTGSIGM LPSASLNADN KGMYEPSHGS APDIAGKDLA NPLATILSAA MMLRYTFNQE AAAQRIERAV KKVLAQGYRT GDIYEPGTKR VGTREMGDAV LAAL
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