| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3064 |
|---|
| Symbol | truA |
|---|
| ID | 7874534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3316919 |
|---|
| End bp | 3317716 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643699987 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002890039 |
|---|
| Protein GI | 237653725 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGCA TCGTGCTCGG CCTCGAATAC GCCGGCGACG CCTTCTGCGG CTGGCAGAGC
CAGGCCCATG GCCGCACCGT GCAGGACGTG CTCGAGCGCG CGCTCGCGCA GATCGCGGGC
GAGCCGGTGC GCACCCACTG CGCCGGACGC ACCGACACCG GCGTGCATGC GAGCGCGCAG
GTGGCGCATT TCGACACCCG CGCCGTGCGC CCGGCCTCGG CCTGGGTGCG CGGTGTCAAC
GCGCTGCTGC CGCCGGCCGT GGTGGTGCGC TGGTCGACCG AGGTGGGCGA CGACTTCCAC
GCCCGCTTCC TGGCCTGCGA GCGGCAGTAC CGCTACATCC TGCACAATGC GCCGACGCGG
CCGGCGATGC TGGCCGGGCG GGTGGGCTGG TACCACCCGG CGCTCGACGT CGAGCGCATG
GCCGCCGCCG CGCAGTGCCT GGTCGGCACC CACGACTTCT CAAGTTTTCG CGCTGCCGGC
TGTCAGGCGA AGACGCCGGT GCGGGTGATG CACGAGGCCC GCGTGGTCCG CCAGGGCGAG
TACCTGCTGT TCGATTTCCG CGCCAACGGC TTCCTCCACC ACATGATCCG CAACCTGGTC
GGCGCGCTGG TGTACGTCGG CAAGGGGCGC TATCCGGTGG CGTGGATGCG CGAGCTGCTC
GAGGCCCGCG ACCGCGCGCG CGCGGCGCCG ACCTTCTCCC CGGACGGGCT CTACCTGTGC
GGCGTGGCCT ACCCGCCGCG CTGGTCGCTG CCGGGTGATG GGCGTATCAT CGCGCTGCCC
CAGCTACCCC TCGTCTGA
|
|---|
| Protein sequence | MRRIVLGLEY AGDAFCGWQS QAHGRTVQDV LERALAQIAG EPVRTHCAGR TDTGVHASAQ
VAHFDTRAVR PASAWVRGVN ALLPPAVVVR WSTEVGDDFH ARFLACERQY RYILHNAPTR
PAMLAGRVGW YHPALDVERM AAAAQCLVGT HDFSSFRAAG CQAKTPVRVM HEARVVRQGE
YLLFDFRANG FLHHMIRNLV GALVYVGKGR YPVAWMRELL EARDRARAAP TFSPDGLYLC
GVAYPPRWSL PGDGRIIALP QLPLV
|
|---|
| |