| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3040 |
|---|
| Symbol | |
|---|
| ID | 7874510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3291208 |
|---|
| End bp | 3292305 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643699963 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_002890015 |
|---|
| Protein GI | 237653701 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.382748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG TGTGGAACTT CAGCGCCGGT CCCGCGGTGC TGCCCGAAGA GGTGCTGCGC
CAGGCCGCCG ACGAGATGCT CGACTGGCAC GGCAGCGGCA TGGGCGTCAT GGAGATGAGC
CATCGCGGCA AGGAATTCAC CGCGATCGCC GCCCAGGCCG AGGCCGACCT GCGCGAGCTG
CTCGCGGTGC CGGCCGGCTA CCGCGTCCTC TTCATGCAGG GCGGGGCCAT CGCCGAGAAC
GCGATCATCC CGATGAACCT GATGGGCGAC AGGCGCGTGG CCGACTACGT GGTCACCGGT
TCGTGGTCGC AGAAGTCGCA GAAGGAAGCG CGCAAGTACG CCGAGGTGAA CATCGCCGCC
TCGTCCGAGG CGGGTGGCTT CACCACCGTG CCGGCGATGG CGGAGTGGAG GTTGTCGGCC
GACCCGGCCT ACGTGTTCAC CTGCACCAAC GAGACCATCG GCGGCCTCGA GTACCCCTTC
GAGCCCGACC TCGCGCAGAT CGGCCGCGGC GAGGTGCCGG TGGTGGCCGA CATGTCCTCG
CACATCCTGT CGCGGGTGAT CGACGTCTCG AAGTACGGCC TCATCTTCGG CGGCGCGCAG
AAGAACATCG GCCCGGCGGG TCTCACCATC GTGATCGTGC GCGAGGACCT GCTCGGGCGC
GCGATGCCGC ACTGCCCCAC CGCCTTCGAC TTCAAGACCG TGGCCGACAA CGGCTCGATG
TACAACACGC CGCCCACCTA CGGCATCTAC ATCGCCGGGC TGGTCTTCCA GTGGCTCAAG
CGCCAGGGCG GGGTGGCGGC GATCGAGGCG CAGAACGTCG CCAAGGCGAA GCTGCTGTAC
GACTTCCTCG ACGCCAGCGA TTTCTACGAG AATCGCATCG ACCCGGCCTG CCGTTCGCGC
ATGAACGTGC CCTTCTTCCT CAAGGACGAG ACCTTGAACG ACGCCTTCCT CGCCGAGGCC
AAGGCCGCCG GGCTGGTGCA GCTGAAGGGC CACAAGTCGG TCGGCGGCAT GCGCGCGTCG
ATCTACAACG CGATGCCGCT CGCGGGCGTG CAGGCGCTGG TCGACTTCAT GCGCGACTTC
GCCGCCCGCC GCGGCTGA
|
|---|
| Protein sequence | MSRVWNFSAG PAVLPEEVLR QAADEMLDWH GSGMGVMEMS HRGKEFTAIA AQAEADLREL
LAVPAGYRVL FMQGGAIAEN AIIPMNLMGD RRVADYVVTG SWSQKSQKEA RKYAEVNIAA
SSEAGGFTTV PAMAEWRLSA DPAYVFTCTN ETIGGLEYPF EPDLAQIGRG EVPVVADMSS
HILSRVIDVS KYGLIFGGAQ KNIGPAGLTI VIVREDLLGR AMPHCPTAFD FKTVADNGSM
YNTPPTYGIY IAGLVFQWLK RQGGVAAIEA QNVAKAKLLY DFLDASDFYE NRIDPACRSR
MNVPFFLKDE TLNDAFLAEA KAAGLVQLKG HKSVGGMRAS IYNAMPLAGV QALVDFMRDF
AARRG
|
|---|
| |