| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3036 |
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| Symbol | |
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| ID | 7874506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3285986 |
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| End bp | 3287947 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643699959 |
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| Product | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase |
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| Protein accession | YP_002890011 |
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| Protein GI | 237653697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase
[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00127659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTC TCGATCTGCC CCCGATGCTG GGCGCCGCCG GCAGCGTCCG CCTGCCCGGC
TCGAAGAGCA TCTCCAACCG CGTGCTGCTG CTGGCCGCGC TCGCCGAGGG CGAGACCGAC
ATTCGCGACC TGCTGCTGTC GGACGACGTC GAACGCATGC TCGAGGCCCT GCGCGCACTC
GGCGTGGACT GGCGGCGCGA GGGCGACAGC CTGAACTACC GTGTATGCGG CGTCGGCGGC
CCCTTCCCGG TCAAGACCGG CGATCTCTTC CTCGGCAACG CCGGCACCGC CTTCCGGCCG
CTCACCGCGG CGCTCGCGCT GTCGGGCGGC GAGTACCGCC TGTCGGGCGT ACCGCGCATG
CACGAGCGCC CGATCGGCGA CCTCGTCGAC GCGCTGCGCC AGCTCGGCGC CGACATCACC
TGCACCGCCA ACGAGGGCTA CCCTCCGCTG CATCTCAAGC CCGCCACGAT CCGTCCCGGT
GGCGTGGTGC GCGTGCGTGG CGATGTCTCC AGCCAGTTCC TCACCGCGCT GCTGATGGCG
CTGCCGCTGA CCGGAGTGGA GACCACGATC GAGGTGGTGG GCGAGCTCAT CTCCAAGCCC
TACATCCGCA TCACCCTCGA GCTGATGGCG CGCTTCGGCG TGCAGGTCGG GCAGCAGGGC
TGGGAGCGCT TCGTGGTGCC GGGCGGCGCG CGCTACCGCA GCCCGGGCAC GGTGTTCGTC
GAGGGCGACG CCTCTTCGGC ATCCTATTTC CTCGCCGCCG GGGCGATCGG TGGTGGGCCG
GTGCGGGTGG AAGGCGTGGG GCGGACCAGC ATCCAGGGCG ACGTGCGCTT CGCCGAGGCG
CTGGAGCAAC TCGGCGCGCG CATCACCCTG GGCGACAACT GGATCGAGGC CGCGGCGCCC
GCCGGCGGCG TGCTGAAGGC CTTCGACCTC GACCTCAACC ACATCCCCGA CGCGGCGATG
ACGCTGGCGG TGGCGGCGCT GTTCGCCGAC GGGCCGTGCC GGCTGCGCAA CATCGCGAGC
TGGCGGGTCA AGGAGACCGA CCGCATCGCC GCGATGGCGA CCGAGCTGCG CAAGCTCGGC
GCCGAGGTGG AGGAGGGCGC CGACTACCTG GTGGTGCAGC GCCCGCCGCG CCTGCAGCCG
GCGGCGATCG ACACCTACGA CGACCACCGC ATGGCGATGT GCTTCTCGCT GGCGAGCCTG
GGGGGCTGCC GCGTGCGCAT CAACGACCCG AAGTGCGTGA ACAAGACCTT CCCCGGCTAT
TTCGAGGCCT TTGCGCAGGT GGCGCGGCCG GTGCCGGTGC TGGCCATCGA TGGTCCCTCG
GCCTCGGGCA AGGGCACGGT GGCGGCGCGC GTCGCCGAGA CGCTGGGCTG GCACTACCTC
GACAGCGGCT CGCTCTACCG CCTGGTGGCG CTGGCCGCGA TGCGCGCGGG AGTGGCCTTC
GACGACGAGG CCGGCGTGGC CGCGCTCGCC GCGGGTCTGC CGGCGCGCTT CGAGGGCGGG
CGGGTGCTGT TGGGAGAGGG CGCGGACCGC GACGTCACCG ACGAGATCCG CTCCGAGGCC
TGCTCGGTCG GCGCCTCGAA GGTCGCCGTG CTGCCGGCGG TGCGTGCGGC CCTGCTCGAC
CGCCAGCGCG ACTACCGCGC GGCCCCCGGC CTGGTGGCCG AAGGCCGCGA CATGGGCTCG
GTGATCTTCC CCGATGCAGG GCTCAAGGTC TTCCTCACCG CCTCGGCCGA GGCGCGCGCC
GAACGCCGCC ATAAGCAGTT GATCGAAAAG GGTTTGGCTG CTAACATGGA AAATCTTCTG
AAAGACCTTC AGGAACGGGA TGCGCGCGAT GCCGCCCGGC CTGTGGCGCC ACTCGTGAAG
CTGCCGGATG CGGCCCTGCT CGACACCACT CAACGGGACG TCGACGAGGC CGTCGCCTTC
GTTCTCGATC TCGTCGGGCG GGGGGGCAAG TCGTCCGGTT GA
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| Protein sequence | MEFLDLPPML GAAGSVRLPG SKSISNRVLL LAALAEGETD IRDLLLSDDV ERMLEALRAL
GVDWRREGDS LNYRVCGVGG PFPVKTGDLF LGNAGTAFRP LTAALALSGG EYRLSGVPRM
HERPIGDLVD ALRQLGADIT CTANEGYPPL HLKPATIRPG GVVRVRGDVS SQFLTALLMA
LPLTGVETTI EVVGELISKP YIRITLELMA RFGVQVGQQG WERFVVPGGA RYRSPGTVFV
EGDASSASYF LAAGAIGGGP VRVEGVGRTS IQGDVRFAEA LEQLGARITL GDNWIEAAAP
AGGVLKAFDL DLNHIPDAAM TLAVAALFAD GPCRLRNIAS WRVKETDRIA AMATELRKLG
AEVEEGADYL VVQRPPRLQP AAIDTYDDHR MAMCFSLASL GGCRVRINDP KCVNKTFPGY
FEAFAQVARP VPVLAIDGPS ASGKGTVAAR VAETLGWHYL DSGSLYRLVA LAAMRAGVAF
DDEAGVAALA AGLPARFEGG RVLLGEGADR DVTDEIRSEA CSVGASKVAV LPAVRAALLD
RQRDYRAAPG LVAEGRDMGS VIFPDAGLKV FLTASAEARA ERRHKQLIEK GLAANMENLL
KDLQERDARD AARPVAPLVK LPDAALLDTT QRDVDEAVAF VLDLVGRGGK SSG
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