| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3035 |
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| Symbol | rpsA |
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| ID | 7874505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3284192 |
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| End bp | 3285895 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643699958 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002890010 |
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| Protein GI | 237653696 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00687642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAACG CCACCCCTGC CTTCGAAGAA AGCTTTGCCG CCCTCTTCGA GGAAAGCCTC
GCCCTCCAGG AAATGCGCGC CGGTGAAGTC ATCACCGCCG AAGTCGTGCG CATCGACCAG
AACTTCGTCG TCGTCAACGC CGGCCTGAAG TCCGAAAGCT ACGTGCCCAT CGAGGAGTTC
CGCAACGACC GCGGCGAACT CGAAGCCAAC ATCGGCGACT TCGTCCACGT CGCCATCGAC
GCCCTCGAAG ACGGCTACGG CGAGACCCGC CTGTCGCGCG ACAAGGCCAA GCGCATCGCC
GCCTGGAACG ACCTCGAGAA GGCGCTCAAC GAAGGCACCC TGGTCAAGGG CGTCATCACC
GGCCGCGTCA AGGGTGGCCT GACCGTCATG ACCAACAGCA TCCGCGCCTT CCTGCCGGGT
TCGCTGGTCG ACATGCGTCC GGTCAAGGAC ACCACGCCGT ACGAAGGCAA GGAATACGAG
TTCAAGGTCA TCAAGCTCGA CCGCAAGCGC AACAACGTCG TGGTCTCGCG TCGCGCCGTG
CTGGAAGAGT CGATGGGCGA AGAGCGCGAA AAGCTGCTCG CCAACCTCAA GGAAGGCACC
GTCATCAAGG GCGTGGTCAA GAACATCACC GACTACGGTG CGTTCGTGGA CCTCGGCGGC
ATCGACGGCC TGCTGCACAT CACCGACCTG GCCTGGCGCC GCGTCCGTCA CCCGTCCGAA
GTGCTGTCGG TCGGCGACGA GATCGAAGCC AAGGTGCTCA AGTTCGACCA GGAAAAGAAC
CGCGTCTCGC TCGGCCTCAA GCAGCTCGGC GAAGACCCGT GGGTCGGCAT CTCGCGCCGC
TACCCGCAGG GCACCCGTCT GTTCGGCAAG GTCACCAACA TCACCGACTA CGGCGCCTTC
GTCGAGGTCG AGCAGGGCAT CGAGGGCCTG GTCCACGTGT CCGAGATGGA CTGGACCAAC
AAGAACATCC ACCCGACCAA GGTCGTGCAG CTGGGCGACG AGGTCGAGGT CATGATCCTC
GAGATCGACG AAGACCGTCG CCGCATCTCG CTGGGCATGA AGCAGTGCAT GTCCAACCCG
TGGGACGATT TTGCCATCAA CCACAAGAAG GGCGACAAGG TCCGTGGCCA GATCAAGTCG
ATCACCGACT TCGGCGTGTT CATCGGCCTG GAAGGCGGCA TCGACGGCCT GGTGCACCTG
TCCGACCTGT CGTGGAGCGA GTCGGGCGAG GATGCCGTGC GCCGCTTCAA GAAGGGCGAC
GAGGTCGAGG CCGTGGTGCT GGCGATCGAC GTCGAGCGCG AGCGCATCTC GCTCGGCATC
AAGCAGCTCG AGGGCGACCC CTACACCAAC TTCATCGCCA CCCACGAGAA GAACAGCCTC
GTGCGCGGCA CCGTGAAGTC GGTCGAGGCC CGTGGCGCGG TGATCTCGCT GGGTGACGAC
GTCGAAGGCT ACCTGCGCGC GTCCGAGGCC GCTCCGCACC GTGTCGACGA CCTCACCACC
ATGTTCAAGG AAGGGGACGA GGTCGAGGCG CTGGTGATCA ACGTGGATCG CAAGACCCGC
TCGATCAGCC TGTCGATTCG TGCCAAGGAC CAGGTCGAGC AGTCCGAAGC CATGAGCAAG
CTGGCTTCCG AGAGCTCCGC TTCCGCCGGT ACCACCAACC TGGGTGCCCT GCTCAAGGCC
AAGCTGAACG AGCAGAAGCA GTAA
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| Protein sequence | MSNATPAFEE SFAALFEESL ALQEMRAGEV ITAEVVRIDQ NFVVVNAGLK SESYVPIEEF
RNDRGELEAN IGDFVHVAID ALEDGYGETR LSRDKAKRIA AWNDLEKALN EGTLVKGVIT
GRVKGGLTVM TNSIRAFLPG SLVDMRPVKD TTPYEGKEYE FKVIKLDRKR NNVVVSRRAV
LEESMGEERE KLLANLKEGT VIKGVVKNIT DYGAFVDLGG IDGLLHITDL AWRRVRHPSE
VLSVGDEIEA KVLKFDQEKN RVSLGLKQLG EDPWVGISRR YPQGTRLFGK VTNITDYGAF
VEVEQGIEGL VHVSEMDWTN KNIHPTKVVQ LGDEVEVMIL EIDEDRRRIS LGMKQCMSNP
WDDFAINHKK GDKVRGQIKS ITDFGVFIGL EGGIDGLVHL SDLSWSESGE DAVRRFKKGD
EVEAVVLAID VERERISLGI KQLEGDPYTN FIATHEKNSL VRGTVKSVEA RGAVISLGDD
VEGYLRASEA APHRVDDLTT MFKEGDEVEA LVINVDRKTR SISLSIRAKD QVEQSEAMSK
LASESSASAG TTNLGALLKA KLNEQKQ
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