| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3014 |
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| Symbol | |
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| ID | 7874403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3266138 |
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| End bp | 3267076 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643699935 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_002889989 |
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| Protein GI | 237653675 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.175723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAC CGGTCAATCT TGATGAACTG GAAAGTCAGC AGGAACCGGA TCTTCCCCCT
GAGGTGGAGG TGTTCTCGTT CCAGGCGCCG CCGGTTGTCG AGAACGAGTT CTTCAGCGAC
GTCACCCAGC TCTACCTCAA CGAGATCGGT GCCAATCCGC TGCTGACCGC CGAGGAGGAG
CTGGTGATCG CCCGCCGCGT GCGGATGGGC GACTTCGATG CCCGGCAGAC GATGATCGAG
CGCAACCTGC GCCTGGTCGT CAATATCGCC AAGCACTACC TCAATCGCGG GATTCCCTTG
CTCGATCTGG TCGAGGAGGG CAACCTCGGC CTCATGCACG CGCTCGAGAA GTTCGACCCC
GAGCGCGGCT TCCGCTTCTC GACTTACGCG ACGTGGTGGA TTCGGCAGAA CATCGAGCGT
GCGATCATGA ACCAGTCGCG CACGATCCGC CTGCCCGTCC ACGTGGTGAA GGAACTCAAC
CAGGTCCTGC GCGCGCAGCG CCACATCGAG GCCGATTGCA ACGGCGAGTC CTCGCTCGAG
CAGATCGCCA ATCGGCTAGG CAAGACGATC GAGGAGGTGC GCAGCATCCT CGCGCTCGGC
GAGCACACCG CCTCGCTCGA CGCACCCCTC GACATCGACC CGTCCTTGTC GATCGGCGAG
TCGCTCGCGG ACGAGCAGCA CATCTCCGCC GACCTTCGCA TACAGTGCTC GGAAGTCGAG
CAACTCGTGC GCGAATGGCT CGCGATCCTC AACGACAAGC AGCGCATGGT GATTCGTCAC
CGCTATGGCA TCGACGAGTG CGAGTTGCTC ACGCTCGAAG AACTCGCCGA ACGCCTCGAA
CTCACCCGCG AGCGCGTGCG CCAGATCCAG CTCGAGGCGC TGGGCCAACT GCGCCGGATC
CTGCGCCGGC GCGGAATCTC GCGCGACGCG CTGCTCTAG
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| Protein sequence | MEEPVNLDEL ESQQEPDLPP EVEVFSFQAP PVVENEFFSD VTQLYLNEIG ANPLLTAEEE
LVIARRVRMG DFDARQTMIE RNLRLVVNIA KHYLNRGIPL LDLVEEGNLG LMHALEKFDP
ERGFRFSTYA TWWIRQNIER AIMNQSRTIR LPVHVVKELN QVLRAQRHIE ADCNGESSLE
QIANRLGKTI EEVRSILALG EHTASLDAPL DIDPSLSIGE SLADEQHISA DLRIQCSEVE
QLVREWLAIL NDKQRMVIRH RYGIDECELL TLEELAERLE LTRERVRQIQ LEALGQLRRI
LRRRGISRDA LL
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