Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2984 |
Symbol | |
ID | 7874374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 3231836 |
End bp | 3238165 |
Gene Length | 6330 bp |
Protein Length | 2109 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643699905 |
Product | PAS sensor protein |
Protein accession | YP_002889960 |
Protein GI | 237653646 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.591507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCGC CCCCGCTGCA ATACCGCCTG CTCAAGCGCC TCTACCAGGG GCGCTGCAGC ACGGTGAGCC GCGTGCTGCT GCCGGGACGC GACGCGCCGG TGATCGTCAA GCAGCTCGAT CGCGGACGCT GCGCGCCCGG GGCGCCCGCA CGCCTGCAGC ACGAGTTCGA GCTGCTCGGC ACGCTCGAGC TGGAAGGCAT TCCGCAGGCG CTCGAGCAGC TCGAGTTCGA GCGCGGCCCG GCGCTGGTGT TCGCCGACCG CGAGGCGCAT TCGCTGCGCC AGGCGATGCG GCCCGGCAGC CGCGAATGGC ACGACTGGCT GGCGCTGATG ATCCGGGTGT GCGAGCTGCT CGGCAGGCTG CACGAGGCCC GCGTCATCCA CAAGCAGATC AATCCGGACC ACATCCTGGT GACCCCGTCC GGCGCGCCCC TGCTGGTCGA TTTCGGCATG GCGACGCGCT TCCTGCGCGA GCAGGCGGAC TGGAACACGC CGCAGCTGGC GGGACATCGC CTGCCCTACC TCGCCCCCGA GCAGAGCGGG CGGATCAACC GCGAGATCGA CTACCGCACC GACTACTACA GCTTCGGCGC CACCCTGTAC GAGCTGCTCA CCGGCCAGCC GCCCTTCGCG GGTCGCGAAG GGCTCGAACT GGTGCATTGC CACATCGCCC GCAAGCCGCG CCCGCCGCAC CACATCAACC GCCTGCTCCC CGAGGCGGTC TCCGCCGTGG TCCTGAAGCT GCTCGCCAAG GACGCCTCCG AGCGCTACCA GTCGGCGCAC GGCATCGTGC ACGACCTGCG CGAGTGCCTG CAGCGGCGGG AACAGCCGGC GGCGCACGAC TTCGTGCTCG CCAGCCGCGA CGTCTCCGCG CGCTTCCAGG TGCCCAGGCG GCTCTACGGC CGCACGGCCC AGCTCGCCGA ACTCGAGGGT CGGGTCGAGG CGTGCGCCGC CGGGGGGCGC GCGATCGTGC TGATCAGCGG CTACACCGGG GTCGGCAAGT CCAGCCTGGT GCACGAGTTG CGCCGTGCCG TCCTCGAGCG CCACGGCCAC TTCGCCAGCG GCAAGTTCGA CCAGTACCGC CGCAACCCAC CCCACTCCGC GCTGCTGCAG GCGCTGCGCG AGCTCGTCCG TCAGCATCTC ACCGAGCCGG GCGAACGCCT CGCGGCCCTC GGCAGCCGTC TGCGCGAGCA GCTCGGCGGC TACCTCGGCA CGCTGGTGCG CCTGCTGCCC GAACTCGGCC TCGTCGTGCC CGACGCCGGC ACGTCGCCGG CCGGCCAGCA CCGCTTCGAC GAGCAGGGCC GCCTGCATCT GTTCTCGCGC CTGATCGACG CGCTCACCGA GCCCGGACAG GCGCTCACGC TTTTCCTCGA CGACCTGCAA TGGGCCGACC CGGCCTCGCT CGGACTCATC GAGTCGCTCG CGACCCACGC CGGGCTGCCG CGCCTGCTGC TCGTCGGCAG CTACCGGCAC AACGAGATCG GGCCGGGCCA TGCGCTCGCC GGGTTCATCG AGCACCTGCG CAGGAGCGCG CTGCCGCCGG TGGAACTGCG CCTGCAGCCG CTCGACCTCG CGCAGGTCCG CCAGCTGCTC GCCGACACCT TGCGCTGCAG CCCGATCGAA TGCGCGCGCC TGGCCGAAGC CTGCCACGAG AAGACGCAGG GCAATCCGTT CTTCCTCAAC CAGCTCCTCG ACGCGGTGCA CGAGGAAGGC CTGATCCGCT TCCACGGCCA ACGCTGGGAA TGGGACGAAG CGGCGATCCG CGCGCGCGCG CTCAGCACCG ACGTGGTCGA GCTCATGGTC GAGCGCCTGC GCCGCCTGCC CGAACGCACG CGCGCGGTGC TGCCGCTGGC GGCCTGCATC GGCGGCACCT TCGACCTCAA GACCCTGTCC ATCGTCGCCG AGGGGCGCGC GCGCCAGCTC GCGCACGACC TCGTGCCGGC GCTCGGCGAG GGCCTCGTGG TGCCGCTCGA CGACGGCGAC CGCCCCGAGC GCGACCGTCT CGGGCGCGCG CGCTATCGCT TCGCGCACGA CCGCGTGCAG CAGACGGCCT ACTCGCTGCT CGCGGACGAC GCGCGCGAGC AGCTCCATCT GCGCGTCGGC CGCCTGCTGC GCCAGAACCT CGACACGGGC GCGCTCGACC GCCGGGTCTT CGAGATCGCC GGCCACCTCA ACCTCGCGCG CAGCGCCATC GACGACCCCG ACGAACGCAT CGCGCTCGCC ACCCTCAACC TGTGCGCCGG GCTGCGCGCG CGCGAATCCG CCGCCTTCGA GTCGGCCCTC GACTATCTCG ACAGCGGCCT CCACGCGCTG CCCGCGGACG CCTGGCGCAC GCAGCACCGG CTGTGCCTCG ACCTGCACCT CGCCGCCGCG GATGCGGCCA ACAGCCGCGG CGACGGCGAG CGCATGCAGG CCCTGCTCGA TGCCGCCCAG GAGCACGCGC ACGCTCCGCT CGACCGCGTA CGCTGCGAGC AGATCCGCAT CCAGGCGCAC GTCGCGCACA ACCGCTTCGG CGCCGGGCTG GAGATCGCGC GCGACACCCT CGCGCGTCTG GGCGTACATC TTCCCGCGGC GCCCGGCCGC CTGCGCATCG CGGCAGAACT GCTGCGCACC CGCCTGCTGA TCCGCCACAC CGCGCCGGAG GAACTGCTGC ACATGCCCGC AGCGACCGAG CCACGCGTGC TCGCCGCGCA GGCGCTGCTC GGAGGCATGT TCGGCATCGT CAAGTTCTCC AGCTCCGCCC TGCGCCCGCT GGTGATGGCG CGCCAGGTCG AGCTCGCGCT GCGCCACGGC CACACCGACG CCAGCGCCCA GGCCCTCGCC GGCTTCGGCG GCGTGCTCTG CGGCGTGCTC GGCGCGATCG ACGAGGGCTA CCGCGCCGGC ACGCTGGCAC TCGCACTGGA GGCGGCGCGC CCTTCGCGCC AGGGGCGCCA GCGCACCTTG TCGCTGTTCA ACTGCTACGT GCGCCACTAC CGCGAACCGC TGCAGTGCGC CCTCGACGGC CTGCGCGAGG CACACGCCGA GGCGCTCGCC TGCGGCGATC TCGAGTACGC CGCGTACAGC CTCGCCGCCG CGATCCAGTA CGCGGTGCCG CTCGCCGACG ATCTCGAGGC CCTCGCCCGG CGCATGCGGG GGCAGTTGGT GCAGCTCGAA CAGACCGGGC AGCAGCAGTC CCTGCAATAC AGCTACATGG CGCTTCAGGC GGTCACCCGG CTGTGCGAGC CGTCGGCCTC GCCCACCGCG CTCGACGGCG AGCATTACCG CGAGGCGGCG ATGCTCGAGG CGCATCGGCG CGGGAACCAC CTCACCGCGG TCTGCCTGCA CCACTTCTAC AAGGCCTTGC TCGCGCTGGT GCATGCGGAC TATCCCGCCG CACTCGCCGA ATGCACCCTG GGCGAAGCCC ACCTGCCCTA CGTCGGCGGC ACCTATACCG CGACCTGGTT CCGCAGCCTG CATGCGCTCG CGCTGCTGCG CACCCTGCCG CCACCGGGCA AGGCGCGCCG GCGCGCGCTG CACACGCTGC GACGCCTGGT GCGCCACGTG CGCATGCAGG CGAGGCATGC GCCCGCCAAC CACGCCCACC GCGTGGCGCT GATCGAGGCC GAACGCCTGC GCGTGCGCGC CCGCCCCGGG GCAGCGGCGG CCTACGATCG CGCCATCGCG CTCGCGGAGC AGGGCGGCTT CTGGCTCGAC GCCGCGCTCG CCTGCGAGTT CGCCGCGCGC TTCCACCTCG ATGCCGGCGA ACGCGCGGTG GCGCGCAGCT GCTTCGACGA CGCCTGCCGA CGCTACCAGC GCCTCGGCGC CCACTCCCCC GTCGTCCATC TGCACGAGCA GCTCGAGGAA TACGGCCTGT GGCCCCGACC GCCGGGGCTC GCGGGCGCGG GCGAAATGCA GGGCGGCCTC GACGAGACCA ACCATTCCTT CGACCTCTCC TCGGTCATCG AGGCCTCGCA AGCGATTTCG GACGAGATCG TGCTCGAGCG CCTGATCGAG CGCCTGCTGC AGCTCGCGCT GACGAGCGCG GGCGCCCAGC GCGGCGCGCT CGCCTTGAGC CGCGACCGGC ATCTGCGCGT CGAGGCGATC GCCGGGCTGG AAGAGGGCTC GACGCTGATG TGCAGCCTCG CCCTCGAAGC CGCGACGAGC CGCGTGCCGG TCAGCGTGCT CAACTACGTC GCCCGCACCG GCGAGGCGCT GGTGCTGGGC GACGCCCCGC GCCAGCAGAT GTTCGCGCAC GACCCCTACA TCCGCAGCCA GGCGCCGCGC TCCTTGCTGT GCATGCCCAT CCTCTACCAC GGCGAGCTCA CCGCCCTGCT CTACCTCGAG CACCGCCTCG GCCGCGACAT CTTCGACCAG CAACGCCTGA AGACGCTGCG CATCCTCGCC GCGCAGGCGG CAATCTCGAT CGAGAACGCC AAGCTCTACC TCGGCCTGCA GCAATCCGAG CAGGCCTACC GCTCGCTGTA CGAGAACGCG ATCGAGGGCA TCTTCCGGGT CGATCCCGAC GGGCGCTTCC TGTCCGCCAA CCCCGCGCTG GTCCGCCTCC TCGGCCACGA CAGCGCGGCA GAGTTCCTCA CCGGCATCAC CGACGTCAGC ACGCAGTGCT TCGCCCGCGC CGAGGACCAG CGCCGCTTCC TCGGCCGCCT CAACATGGAG GAGAAGGTGG TCGGCTTCGA GACGCGCTGG CGCCGGCGCG ACGGCAGCGA GGTCGAGGTC TCCATCTCGG CCCGCCGCGT GCTCGACGAC GGCGGGCGGC TGCGCTGCTA CGAGGGCTCG CTCACCGACA TCGGCGAACG CAAGGCCAAG GAGCGCGCCG AACTCGCACG CGAGCGCGCC GAGGCCGCCA GCCGCGCCAA GAGCGACTTC CTCGCCGCGA TGAGCCACGA GATCCGCACG CCGATGAACG GCATCCTCGG CATGGCGCAG CTGCTCGCGC GCTCCGGGCT GGCGCCGGGC CAGGCCGAAT GGGTGGACGC GATCCGGGCC TCGGGCAGCA CGCTGCTCGG GATCCTGGAC GACGTGCTCG ACTTCAGCAA GATCGAGGCC GGGCAGCTCA CGCTCGAGTC CGCGCCCTTC TCGCCGGCCG AGGCGCTCGC CGCCCTGCGT CCGATGCTGG CGACGATGAG CGCACAGAAA GGGCTAGTGC TGCGCCTGGA GATCGATCCG GCGCTCCCCG GAGGGGTGCT CGGCGACCGT CGCGCACTGC ACCAGATCGT GCTCAACCTG GCCGGCAACG CGGTGAAGTT CACCGCGCGC GGCTTCGTCG CGGTGCGCGC GCGGTGCCTG CCGGCGCGCG CGGGGCGCTG CCGCCTGGGC CTGGAGGTCG AGGACAGCGG CATCGGCATC GCCGAGGAGG CGCAGCGCCG CATCTTCACC GAATTCACCC AGGCCGACGG TTCGATCACC CGCCGCTTCG GCGGCACCGG CCTGGGGCTG GCGATCTGTC GGCGCCTCGT CGACCTGCAG GGTGGAAGCC TGGGCGTGCG CAGCCGCCCG GGAGAGGGCA GCACCTTCTC CTGCGAACTG GAATACCCCC TCGCAACCCC GGCGCCACGG GCATCGCCGC GTCCGCACGC TGCCATCGGC GAGGCGCGCC TGCACGTGCT GGTGGTCGAG GACGTGGAAC TGAACCGCTG CATCGCCGGC ACGCTGCTCG AGGACGAGGG CCACACCGTG CGCTTCGCGT CCGACGGCTA CGGCGCGCTC GAGCTGCACG AGCGCGAGGA TTTCGACACG ATCCTGCTCG ACATCCACCT TCCCGACCTC GACGGCATGG AGGTCGCACG CCGCATCCGC CGCCACCCCG ACGCGCGCAA GGCGCGCGCG CGCATCGTCG CGCTCACCGC TTCGATCACC ACCGACGAGG TGGCGCGTTA CCGCGCGGCC GGCGTGGACG CGGTCGTCGG CAAGCCCTTC GACTTCGACG AGCTGATCCG CAGCCTGCGC GAGCCCCCCG TACCGCCCGC CGCGGCACCG GGGAGCGCCC TGATGGACAC GCGCCTGCTC GCCACCCATT TCGCCCGCCT CGGCGACGAG CGCGTGCGGC CGATGATGGA CATGCTCGCC ACCCAGGGCC GCGCCGGGCT CGCCGAGTTC GCCGCGAGCG CCGACCCCGC GACCCAACGC GAGCGCCTGC ACCGGCTCGT CGGCATGGCC GCGAACCTGG GCCTCGCCGC CTTCGCCACG CGTTGCCGGG AGCTCGAGGC GACGCCCCTC CCGGCCGACC TGCGCGCACA GGCCGGCGCG CTGCGGACGC TGTTCGAGGA CAGCATCGCG GCGCTGCACG CGTTCGCCCC CCGGGACGCG CAAGCTGCGC TCGAAGCCGC GGCGCGCTGA
|
Protein sequence | MNAPPLQYRL LKRLYQGRCS TVSRVLLPGR DAPVIVKQLD RGRCAPGAPA RLQHEFELLG TLELEGIPQA LEQLEFERGP ALVFADREAH SLRQAMRPGS REWHDWLALM IRVCELLGRL HEARVIHKQI NPDHILVTPS GAPLLVDFGM ATRFLREQAD WNTPQLAGHR LPYLAPEQSG RINREIDYRT DYYSFGATLY ELLTGQPPFA GREGLELVHC HIARKPRPPH HINRLLPEAV SAVVLKLLAK DASERYQSAH GIVHDLRECL QRREQPAAHD FVLASRDVSA RFQVPRRLYG RTAQLAELEG RVEACAAGGR AIVLISGYTG VGKSSLVHEL RRAVLERHGH FASGKFDQYR RNPPHSALLQ ALRELVRQHL TEPGERLAAL GSRLREQLGG YLGTLVRLLP ELGLVVPDAG TSPAGQHRFD EQGRLHLFSR LIDALTEPGQ ALTLFLDDLQ WADPASLGLI ESLATHAGLP RLLLVGSYRH NEIGPGHALA GFIEHLRRSA LPPVELRLQP LDLAQVRQLL ADTLRCSPIE CARLAEACHE KTQGNPFFLN QLLDAVHEEG LIRFHGQRWE WDEAAIRARA LSTDVVELMV ERLRRLPERT RAVLPLAACI GGTFDLKTLS IVAEGRARQL AHDLVPALGE GLVVPLDDGD RPERDRLGRA RYRFAHDRVQ QTAYSLLADD AREQLHLRVG RLLRQNLDTG ALDRRVFEIA GHLNLARSAI DDPDERIALA TLNLCAGLRA RESAAFESAL DYLDSGLHAL PADAWRTQHR LCLDLHLAAA DAANSRGDGE RMQALLDAAQ EHAHAPLDRV RCEQIRIQAH VAHNRFGAGL EIARDTLARL GVHLPAAPGR LRIAAELLRT RLLIRHTAPE ELLHMPAATE PRVLAAQALL GGMFGIVKFS SSALRPLVMA RQVELALRHG HTDASAQALA GFGGVLCGVL GAIDEGYRAG TLALALEAAR PSRQGRQRTL SLFNCYVRHY REPLQCALDG LREAHAEALA CGDLEYAAYS LAAAIQYAVP LADDLEALAR RMRGQLVQLE QTGQQQSLQY SYMALQAVTR LCEPSASPTA LDGEHYREAA MLEAHRRGNH LTAVCLHHFY KALLALVHAD YPAALAECTL GEAHLPYVGG TYTATWFRSL HALALLRTLP PPGKARRRAL HTLRRLVRHV RMQARHAPAN HAHRVALIEA ERLRVRARPG AAAAYDRAIA LAEQGGFWLD AALACEFAAR FHLDAGERAV ARSCFDDACR RYQRLGAHSP VVHLHEQLEE YGLWPRPPGL AGAGEMQGGL DETNHSFDLS SVIEASQAIS DEIVLERLIE RLLQLALTSA GAQRGALALS RDRHLRVEAI AGLEEGSTLM CSLALEAATS RVPVSVLNYV ARTGEALVLG DAPRQQMFAH DPYIRSQAPR SLLCMPILYH GELTALLYLE HRLGRDIFDQ QRLKTLRILA AQAAISIENA KLYLGLQQSE QAYRSLYENA IEGIFRVDPD GRFLSANPAL VRLLGHDSAA EFLTGITDVS TQCFARAEDQ RRFLGRLNME EKVVGFETRW RRRDGSEVEV SISARRVLDD GGRLRCYEGS LTDIGERKAK ERAELARERA EAASRAKSDF LAAMSHEIRT PMNGILGMAQ LLARSGLAPG QAEWVDAIRA SGSTLLGILD DVLDFSKIEA GQLTLESAPF SPAEALAALR PMLATMSAQK GLVLRLEIDP ALPGGVLGDR RALHQIVLNL AGNAVKFTAR GFVAVRARCL PARAGRCRLG LEVEDSGIGI AEEAQRRIFT EFTQADGSIT RRFGGTGLGL AICRRLVDLQ GGSLGVRSRP GEGSTFSCEL EYPLATPAPR ASPRPHAAIG EARLHVLVVE DVELNRCIAG TLLEDEGHTV RFASDGYGAL ELHEREDFDT ILLDIHLPDL DGMEVARRIR RHPDARKARA RIVALTASIT TDEVARYRAA GVDAVVGKPF DFDELIRSLR EPPVPPAAAP GSALMDTRLL ATHFARLGDE RVRPMMDMLA TQGRAGLAEF AASADPATQR ERLHRLVGMA ANLGLAAFAT RCRELEATPL PADLRAQAGA LRTLFEDSIA ALHAFAPRDA QAALEAAAR
|
| |