Gene Tmz1t_2984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2984 
Symbol 
ID7874374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3231836 
End bp3238165 
Gene Length6330 bp 
Protein Length2109 aa 
Translation table11 
GC content73% 
IMG OID643699905 
ProductPAS sensor protein 
Protein accessionYP_002889960 
Protein GI237653646 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.591507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC CCCCGCTGCA ATACCGCCTG CTCAAGCGCC TCTACCAGGG GCGCTGCAGC 
ACGGTGAGCC GCGTGCTGCT GCCGGGACGC GACGCGCCGG TGATCGTCAA GCAGCTCGAT
CGCGGACGCT GCGCGCCCGG GGCGCCCGCA CGCCTGCAGC ACGAGTTCGA GCTGCTCGGC
ACGCTCGAGC TGGAAGGCAT TCCGCAGGCG CTCGAGCAGC TCGAGTTCGA GCGCGGCCCG
GCGCTGGTGT TCGCCGACCG CGAGGCGCAT TCGCTGCGCC AGGCGATGCG GCCCGGCAGC
CGCGAATGGC ACGACTGGCT GGCGCTGATG ATCCGGGTGT GCGAGCTGCT CGGCAGGCTG
CACGAGGCCC GCGTCATCCA CAAGCAGATC AATCCGGACC ACATCCTGGT GACCCCGTCC
GGCGCGCCCC TGCTGGTCGA TTTCGGCATG GCGACGCGCT TCCTGCGCGA GCAGGCGGAC
TGGAACACGC CGCAGCTGGC GGGACATCGC CTGCCCTACC TCGCCCCCGA GCAGAGCGGG
CGGATCAACC GCGAGATCGA CTACCGCACC GACTACTACA GCTTCGGCGC CACCCTGTAC
GAGCTGCTCA CCGGCCAGCC GCCCTTCGCG GGTCGCGAAG GGCTCGAACT GGTGCATTGC
CACATCGCCC GCAAGCCGCG CCCGCCGCAC CACATCAACC GCCTGCTCCC CGAGGCGGTC
TCCGCCGTGG TCCTGAAGCT GCTCGCCAAG GACGCCTCCG AGCGCTACCA GTCGGCGCAC
GGCATCGTGC ACGACCTGCG CGAGTGCCTG CAGCGGCGGG AACAGCCGGC GGCGCACGAC
TTCGTGCTCG CCAGCCGCGA CGTCTCCGCG CGCTTCCAGG TGCCCAGGCG GCTCTACGGC
CGCACGGCCC AGCTCGCCGA ACTCGAGGGT CGGGTCGAGG CGTGCGCCGC CGGGGGGCGC
GCGATCGTGC TGATCAGCGG CTACACCGGG GTCGGCAAGT CCAGCCTGGT GCACGAGTTG
CGCCGTGCCG TCCTCGAGCG CCACGGCCAC TTCGCCAGCG GCAAGTTCGA CCAGTACCGC
CGCAACCCAC CCCACTCCGC GCTGCTGCAG GCGCTGCGCG AGCTCGTCCG TCAGCATCTC
ACCGAGCCGG GCGAACGCCT CGCGGCCCTC GGCAGCCGTC TGCGCGAGCA GCTCGGCGGC
TACCTCGGCA CGCTGGTGCG CCTGCTGCCC GAACTCGGCC TCGTCGTGCC CGACGCCGGC
ACGTCGCCGG CCGGCCAGCA CCGCTTCGAC GAGCAGGGCC GCCTGCATCT GTTCTCGCGC
CTGATCGACG CGCTCACCGA GCCCGGACAG GCGCTCACGC TTTTCCTCGA CGACCTGCAA
TGGGCCGACC CGGCCTCGCT CGGACTCATC GAGTCGCTCG CGACCCACGC CGGGCTGCCG
CGCCTGCTGC TCGTCGGCAG CTACCGGCAC AACGAGATCG GGCCGGGCCA TGCGCTCGCC
GGGTTCATCG AGCACCTGCG CAGGAGCGCG CTGCCGCCGG TGGAACTGCG CCTGCAGCCG
CTCGACCTCG CGCAGGTCCG CCAGCTGCTC GCCGACACCT TGCGCTGCAG CCCGATCGAA
TGCGCGCGCC TGGCCGAAGC CTGCCACGAG AAGACGCAGG GCAATCCGTT CTTCCTCAAC
CAGCTCCTCG ACGCGGTGCA CGAGGAAGGC CTGATCCGCT TCCACGGCCA ACGCTGGGAA
TGGGACGAAG CGGCGATCCG CGCGCGCGCG CTCAGCACCG ACGTGGTCGA GCTCATGGTC
GAGCGCCTGC GCCGCCTGCC CGAACGCACG CGCGCGGTGC TGCCGCTGGC GGCCTGCATC
GGCGGCACCT TCGACCTCAA GACCCTGTCC ATCGTCGCCG AGGGGCGCGC GCGCCAGCTC
GCGCACGACC TCGTGCCGGC GCTCGGCGAG GGCCTCGTGG TGCCGCTCGA CGACGGCGAC
CGCCCCGAGC GCGACCGTCT CGGGCGCGCG CGCTATCGCT TCGCGCACGA CCGCGTGCAG
CAGACGGCCT ACTCGCTGCT CGCGGACGAC GCGCGCGAGC AGCTCCATCT GCGCGTCGGC
CGCCTGCTGC GCCAGAACCT CGACACGGGC GCGCTCGACC GCCGGGTCTT CGAGATCGCC
GGCCACCTCA ACCTCGCGCG CAGCGCCATC GACGACCCCG ACGAACGCAT CGCGCTCGCC
ACCCTCAACC TGTGCGCCGG GCTGCGCGCG CGCGAATCCG CCGCCTTCGA GTCGGCCCTC
GACTATCTCG ACAGCGGCCT CCACGCGCTG CCCGCGGACG CCTGGCGCAC GCAGCACCGG
CTGTGCCTCG ACCTGCACCT CGCCGCCGCG GATGCGGCCA ACAGCCGCGG CGACGGCGAG
CGCATGCAGG CCCTGCTCGA TGCCGCCCAG GAGCACGCGC ACGCTCCGCT CGACCGCGTA
CGCTGCGAGC AGATCCGCAT CCAGGCGCAC GTCGCGCACA ACCGCTTCGG CGCCGGGCTG
GAGATCGCGC GCGACACCCT CGCGCGTCTG GGCGTACATC TTCCCGCGGC GCCCGGCCGC
CTGCGCATCG CGGCAGAACT GCTGCGCACC CGCCTGCTGA TCCGCCACAC CGCGCCGGAG
GAACTGCTGC ACATGCCCGC AGCGACCGAG CCACGCGTGC TCGCCGCGCA GGCGCTGCTC
GGAGGCATGT TCGGCATCGT CAAGTTCTCC AGCTCCGCCC TGCGCCCGCT GGTGATGGCG
CGCCAGGTCG AGCTCGCGCT GCGCCACGGC CACACCGACG CCAGCGCCCA GGCCCTCGCC
GGCTTCGGCG GCGTGCTCTG CGGCGTGCTC GGCGCGATCG ACGAGGGCTA CCGCGCCGGC
ACGCTGGCAC TCGCACTGGA GGCGGCGCGC CCTTCGCGCC AGGGGCGCCA GCGCACCTTG
TCGCTGTTCA ACTGCTACGT GCGCCACTAC CGCGAACCGC TGCAGTGCGC CCTCGACGGC
CTGCGCGAGG CACACGCCGA GGCGCTCGCC TGCGGCGATC TCGAGTACGC CGCGTACAGC
CTCGCCGCCG CGATCCAGTA CGCGGTGCCG CTCGCCGACG ATCTCGAGGC CCTCGCCCGG
CGCATGCGGG GGCAGTTGGT GCAGCTCGAA CAGACCGGGC AGCAGCAGTC CCTGCAATAC
AGCTACATGG CGCTTCAGGC GGTCACCCGG CTGTGCGAGC CGTCGGCCTC GCCCACCGCG
CTCGACGGCG AGCATTACCG CGAGGCGGCG ATGCTCGAGG CGCATCGGCG CGGGAACCAC
CTCACCGCGG TCTGCCTGCA CCACTTCTAC AAGGCCTTGC TCGCGCTGGT GCATGCGGAC
TATCCCGCCG CACTCGCCGA ATGCACCCTG GGCGAAGCCC ACCTGCCCTA CGTCGGCGGC
ACCTATACCG CGACCTGGTT CCGCAGCCTG CATGCGCTCG CGCTGCTGCG CACCCTGCCG
CCACCGGGCA AGGCGCGCCG GCGCGCGCTG CACACGCTGC GACGCCTGGT GCGCCACGTG
CGCATGCAGG CGAGGCATGC GCCCGCCAAC CACGCCCACC GCGTGGCGCT GATCGAGGCC
GAACGCCTGC GCGTGCGCGC CCGCCCCGGG GCAGCGGCGG CCTACGATCG CGCCATCGCG
CTCGCGGAGC AGGGCGGCTT CTGGCTCGAC GCCGCGCTCG CCTGCGAGTT CGCCGCGCGC
TTCCACCTCG ATGCCGGCGA ACGCGCGGTG GCGCGCAGCT GCTTCGACGA CGCCTGCCGA
CGCTACCAGC GCCTCGGCGC CCACTCCCCC GTCGTCCATC TGCACGAGCA GCTCGAGGAA
TACGGCCTGT GGCCCCGACC GCCGGGGCTC GCGGGCGCGG GCGAAATGCA GGGCGGCCTC
GACGAGACCA ACCATTCCTT CGACCTCTCC TCGGTCATCG AGGCCTCGCA AGCGATTTCG
GACGAGATCG TGCTCGAGCG CCTGATCGAG CGCCTGCTGC AGCTCGCGCT GACGAGCGCG
GGCGCCCAGC GCGGCGCGCT CGCCTTGAGC CGCGACCGGC ATCTGCGCGT CGAGGCGATC
GCCGGGCTGG AAGAGGGCTC GACGCTGATG TGCAGCCTCG CCCTCGAAGC CGCGACGAGC
CGCGTGCCGG TCAGCGTGCT CAACTACGTC GCCCGCACCG GCGAGGCGCT GGTGCTGGGC
GACGCCCCGC GCCAGCAGAT GTTCGCGCAC GACCCCTACA TCCGCAGCCA GGCGCCGCGC
TCCTTGCTGT GCATGCCCAT CCTCTACCAC GGCGAGCTCA CCGCCCTGCT CTACCTCGAG
CACCGCCTCG GCCGCGACAT CTTCGACCAG CAACGCCTGA AGACGCTGCG CATCCTCGCC
GCGCAGGCGG CAATCTCGAT CGAGAACGCC AAGCTCTACC TCGGCCTGCA GCAATCCGAG
CAGGCCTACC GCTCGCTGTA CGAGAACGCG ATCGAGGGCA TCTTCCGGGT CGATCCCGAC
GGGCGCTTCC TGTCCGCCAA CCCCGCGCTG GTCCGCCTCC TCGGCCACGA CAGCGCGGCA
GAGTTCCTCA CCGGCATCAC CGACGTCAGC ACGCAGTGCT TCGCCCGCGC CGAGGACCAG
CGCCGCTTCC TCGGCCGCCT CAACATGGAG GAGAAGGTGG TCGGCTTCGA GACGCGCTGG
CGCCGGCGCG ACGGCAGCGA GGTCGAGGTC TCCATCTCGG CCCGCCGCGT GCTCGACGAC
GGCGGGCGGC TGCGCTGCTA CGAGGGCTCG CTCACCGACA TCGGCGAACG CAAGGCCAAG
GAGCGCGCCG AACTCGCACG CGAGCGCGCC GAGGCCGCCA GCCGCGCCAA GAGCGACTTC
CTCGCCGCGA TGAGCCACGA GATCCGCACG CCGATGAACG GCATCCTCGG CATGGCGCAG
CTGCTCGCGC GCTCCGGGCT GGCGCCGGGC CAGGCCGAAT GGGTGGACGC GATCCGGGCC
TCGGGCAGCA CGCTGCTCGG GATCCTGGAC GACGTGCTCG ACTTCAGCAA GATCGAGGCC
GGGCAGCTCA CGCTCGAGTC CGCGCCCTTC TCGCCGGCCG AGGCGCTCGC CGCCCTGCGT
CCGATGCTGG CGACGATGAG CGCACAGAAA GGGCTAGTGC TGCGCCTGGA GATCGATCCG
GCGCTCCCCG GAGGGGTGCT CGGCGACCGT CGCGCACTGC ACCAGATCGT GCTCAACCTG
GCCGGCAACG CGGTGAAGTT CACCGCGCGC GGCTTCGTCG CGGTGCGCGC GCGGTGCCTG
CCGGCGCGCG CGGGGCGCTG CCGCCTGGGC CTGGAGGTCG AGGACAGCGG CATCGGCATC
GCCGAGGAGG CGCAGCGCCG CATCTTCACC GAATTCACCC AGGCCGACGG TTCGATCACC
CGCCGCTTCG GCGGCACCGG CCTGGGGCTG GCGATCTGTC GGCGCCTCGT CGACCTGCAG
GGTGGAAGCC TGGGCGTGCG CAGCCGCCCG GGAGAGGGCA GCACCTTCTC CTGCGAACTG
GAATACCCCC TCGCAACCCC GGCGCCACGG GCATCGCCGC GTCCGCACGC TGCCATCGGC
GAGGCGCGCC TGCACGTGCT GGTGGTCGAG GACGTGGAAC TGAACCGCTG CATCGCCGGC
ACGCTGCTCG AGGACGAGGG CCACACCGTG CGCTTCGCGT CCGACGGCTA CGGCGCGCTC
GAGCTGCACG AGCGCGAGGA TTTCGACACG ATCCTGCTCG ACATCCACCT TCCCGACCTC
GACGGCATGG AGGTCGCACG CCGCATCCGC CGCCACCCCG ACGCGCGCAA GGCGCGCGCG
CGCATCGTCG CGCTCACCGC TTCGATCACC ACCGACGAGG TGGCGCGTTA CCGCGCGGCC
GGCGTGGACG CGGTCGTCGG CAAGCCCTTC GACTTCGACG AGCTGATCCG CAGCCTGCGC
GAGCCCCCCG TACCGCCCGC CGCGGCACCG GGGAGCGCCC TGATGGACAC GCGCCTGCTC
GCCACCCATT TCGCCCGCCT CGGCGACGAG CGCGTGCGGC CGATGATGGA CATGCTCGCC
ACCCAGGGCC GCGCCGGGCT CGCCGAGTTC GCCGCGAGCG CCGACCCCGC GACCCAACGC
GAGCGCCTGC ACCGGCTCGT CGGCATGGCC GCGAACCTGG GCCTCGCCGC CTTCGCCACG
CGTTGCCGGG AGCTCGAGGC GACGCCCCTC CCGGCCGACC TGCGCGCACA GGCCGGCGCG
CTGCGGACGC TGTTCGAGGA CAGCATCGCG GCGCTGCACG CGTTCGCCCC CCGGGACGCG
CAAGCTGCGC TCGAAGCCGC GGCGCGCTGA
 
Protein sequence
MNAPPLQYRL LKRLYQGRCS TVSRVLLPGR DAPVIVKQLD RGRCAPGAPA RLQHEFELLG 
TLELEGIPQA LEQLEFERGP ALVFADREAH SLRQAMRPGS REWHDWLALM IRVCELLGRL
HEARVIHKQI NPDHILVTPS GAPLLVDFGM ATRFLREQAD WNTPQLAGHR LPYLAPEQSG
RINREIDYRT DYYSFGATLY ELLTGQPPFA GREGLELVHC HIARKPRPPH HINRLLPEAV
SAVVLKLLAK DASERYQSAH GIVHDLRECL QRREQPAAHD FVLASRDVSA RFQVPRRLYG
RTAQLAELEG RVEACAAGGR AIVLISGYTG VGKSSLVHEL RRAVLERHGH FASGKFDQYR
RNPPHSALLQ ALRELVRQHL TEPGERLAAL GSRLREQLGG YLGTLVRLLP ELGLVVPDAG
TSPAGQHRFD EQGRLHLFSR LIDALTEPGQ ALTLFLDDLQ WADPASLGLI ESLATHAGLP
RLLLVGSYRH NEIGPGHALA GFIEHLRRSA LPPVELRLQP LDLAQVRQLL ADTLRCSPIE
CARLAEACHE KTQGNPFFLN QLLDAVHEEG LIRFHGQRWE WDEAAIRARA LSTDVVELMV
ERLRRLPERT RAVLPLAACI GGTFDLKTLS IVAEGRARQL AHDLVPALGE GLVVPLDDGD
RPERDRLGRA RYRFAHDRVQ QTAYSLLADD AREQLHLRVG RLLRQNLDTG ALDRRVFEIA
GHLNLARSAI DDPDERIALA TLNLCAGLRA RESAAFESAL DYLDSGLHAL PADAWRTQHR
LCLDLHLAAA DAANSRGDGE RMQALLDAAQ EHAHAPLDRV RCEQIRIQAH VAHNRFGAGL
EIARDTLARL GVHLPAAPGR LRIAAELLRT RLLIRHTAPE ELLHMPAATE PRVLAAQALL
GGMFGIVKFS SSALRPLVMA RQVELALRHG HTDASAQALA GFGGVLCGVL GAIDEGYRAG
TLALALEAAR PSRQGRQRTL SLFNCYVRHY REPLQCALDG LREAHAEALA CGDLEYAAYS
LAAAIQYAVP LADDLEALAR RMRGQLVQLE QTGQQQSLQY SYMALQAVTR LCEPSASPTA
LDGEHYREAA MLEAHRRGNH LTAVCLHHFY KALLALVHAD YPAALAECTL GEAHLPYVGG
TYTATWFRSL HALALLRTLP PPGKARRRAL HTLRRLVRHV RMQARHAPAN HAHRVALIEA
ERLRVRARPG AAAAYDRAIA LAEQGGFWLD AALACEFAAR FHLDAGERAV ARSCFDDACR
RYQRLGAHSP VVHLHEQLEE YGLWPRPPGL AGAGEMQGGL DETNHSFDLS SVIEASQAIS
DEIVLERLIE RLLQLALTSA GAQRGALALS RDRHLRVEAI AGLEEGSTLM CSLALEAATS
RVPVSVLNYV ARTGEALVLG DAPRQQMFAH DPYIRSQAPR SLLCMPILYH GELTALLYLE
HRLGRDIFDQ QRLKTLRILA AQAAISIENA KLYLGLQQSE QAYRSLYENA IEGIFRVDPD
GRFLSANPAL VRLLGHDSAA EFLTGITDVS TQCFARAEDQ RRFLGRLNME EKVVGFETRW
RRRDGSEVEV SISARRVLDD GGRLRCYEGS LTDIGERKAK ERAELARERA EAASRAKSDF
LAAMSHEIRT PMNGILGMAQ LLARSGLAPG QAEWVDAIRA SGSTLLGILD DVLDFSKIEA
GQLTLESAPF SPAEALAALR PMLATMSAQK GLVLRLEIDP ALPGGVLGDR RALHQIVLNL
AGNAVKFTAR GFVAVRARCL PARAGRCRLG LEVEDSGIGI AEEAQRRIFT EFTQADGSIT
RRFGGTGLGL AICRRLVDLQ GGSLGVRSRP GEGSTFSCEL EYPLATPAPR ASPRPHAAIG
EARLHVLVVE DVELNRCIAG TLLEDEGHTV RFASDGYGAL ELHEREDFDT ILLDIHLPDL
DGMEVARRIR RHPDARKARA RIVALTASIT TDEVARYRAA GVDAVVGKPF DFDELIRSLR
EPPVPPAAAP GSALMDTRLL ATHFARLGDE RVRPMMDMLA TQGRAGLAEF AASADPATQR
ERLHRLVGMA ANLGLAAFAT RCRELEATPL PADLRAQAGA LRTLFEDSIA ALHAFAPRDA
QAALEAAAR