Gene Tmz1t_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2970 
Symbol 
ID7874360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3214496 
End bp3215527 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content73% 
IMG OID643699891 
Producthypothetical protein 
Protein accessionYP_002889946 
Protein GI237653632 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCT TGCCGACGCC GCGCCCGCTG CGCGCGCTGT TCTCCCCCAC CGGCCGCTCG 
ACCCTCTCCG CGACGCTGTC CATGACGCTC TCCGCAAGCC TCGTGCTGGC GGTGGGCGAT
GTGCTCGCCC AGGGTGCGGC CGCCGAGCCT GCCGCCTTCG TGCCGCGCCC CGCGGTGCGC
TCGCCCTTCG CCGAGCACAG CATGATCCTC GACGCGACCC GGGCCGGCAC ACGCCTGGTC
GCGGTGGGCG AGCGTGGCGT CGTGCTGCTC TCCGATGACG AGGGCGCGCA CTGGCGACAG
GCGGGCACGG TGCCGGTCGA CGCGACCCTG ACCGCGGTGA GCTTCGCCGA CGCGCGCGAG
GGCTGGGCGG TGGGGCATCT CGGCGTGATC CTGCACAGCG CCGACGGCGG CGAGACCTGG
AGCGTGCAGC GCATCGACCC TGTCGAGGAC AGGCCGCTGT TCGCTGTGGC GTTCACCGAC
GCACGCAACG GAGTCGCGGT CGGGCTGTGG TCGCTGATGC TGCGCACCCG CGACGGCGGC
CGGACCTGGG AGGCGGCGGA GCTGCCGCCG CCGCCGGGCG ACACGCGCGC CGACGCCAAC
CTGATGAGCG TGTTCGGCGA TGGGGAGGGG CGACTATTCA TCGCCGGGGA GCGCGGCCTG
GTGTTGCGCT CGCTCGATGG CGGCGCGACC TGGAGCTATC ATCCGACCGG CTATCGCGGC
ACGTTCTGGA GCGGCACCGC GCTCGCCGAC GGCACGCTGA TCGTCGGTGG CCTGCGCGGC
AGCGTCTATC GCAGCACCGA CAACGGCGAA CACTGGCAGC GCGTCGAGAC CGGCTCGCAG
AGCTCGGTCA CCGACCTCGT CGCCTTCGAC GGTCGCGTGC ATGCGGTCGG CCTCGACGGT
GTCAGCCTCG ACAGCCGCGA TGGCGGGGCG AGCTTCGCGG TGGAGCGGCG GGCGGATCGC
CTGTCGCTGA CCGCCGCGGT GGCGACGGCC GGTGGTGTGC TGCATTTTTC ACGCGCTGGC
CTGGTGCGCT GA
 
Protein sequence
MNPLPTPRPL RALFSPTGRS TLSATLSMTL SASLVLAVGD VLAQGAAAEP AAFVPRPAVR 
SPFAEHSMIL DATRAGTRLV AVGERGVVLL SDDEGAHWRQ AGTVPVDATL TAVSFADARE
GWAVGHLGVI LHSADGGETW SVQRIDPVED RPLFAVAFTD ARNGVAVGLW SLMLRTRDGG
RTWEAAELPP PPGDTRADAN LMSVFGDGEG RLFIAGERGL VLRSLDGGAT WSYHPTGYRG
TFWSGTALAD GTLIVGGLRG SVYRSTDNGE HWQRVETGSQ SSVTDLVAFD GRVHAVGLDG
VSLDSRDGGA SFAVERRADR LSLTAAVATA GGVLHFSRAG LVR