Gene Tmz1t_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2948 
Symbol 
ID7874338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3188934 
End bp3189782 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID643699869 
Productbenzoyl-CoA reductase, subunit D 
Protein accessionYP_002889924 
Protein GI237653610 
COG category[I] Lipid transport and metabolism 
COG ID[COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative
[TIGR02261] benzoyl-CoA reductase, bcr type, subunit D 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA CCGCAGGCAT CGACATCGGC ACCGGCGCCG TCAAGACCGT CCTCTTCCGC 
GTCGAGGGCG ACAAGACCGA GTGGCTGGGC AAGCGCAACG ACCGCATCCG TCAGCGCGAT
CCCTTCAAGC TCGCCGAGGA GGCCTACCAC GCGCTCCTCG AGGAGGCCGG CCTCAAGGCG
TCCGACGTGG ATTACGTCGC CACCACCGGC GAGGGCGAGA GCCTCCACTT CCACACCGGC
CACTTCTACT CCATGACGAC CCATGCGCGT GGCGCGGTCT ACCTCAACCC GGAAGCGCGC
GCGGTGCTCG ACATCGGCGC GTTGCACGGG CGGGCGATCC GCAACGACGA GCGCGGCAAG
GTCGAGACCT ACAAGATGAC CAGCCAGTGC GCCTCGGGCT CGGGGCAGTT CCTCGAGAAC
ATCGCGCGCT ACCTCGGCAT CGCCCAGGAC GAGATCGGCT CGCTGTCGAA CCAGGCCGAC
AACCCCGAGG TGGTGTCGAG CATCTGCGCG GTGCTGGCCG AGACCGACGT CATCAACATG
GTGTCGCGCG GCATCACGGC GCCCAACATC CTGAAGGGCA TCCACATCTC GATGGCCGGT
CGCCTGGCCA AGCTGCTCAA GTCGATCGGC GCGCGCGAGG GCGTGGTGCT CTGCACCGGC
GGCCTGGCGC TCGACGAGGG CCTGCTCAAC ACCCTCAACG AGTCGGTCAA GGAGCAGAAG
ATGAACGTGA CTGCGTTCAA CCACCCGGAC TCGCCCTTCG CCGGTGCGAT CGGCGCGGCC
CTGTGGGGTG CCTTCCGCCA CGAGAAACTC GCGCGCCTGG GCGGGCAGCA GCTCGCCGCC
GCGGCCTGA
 
Protein sequence
MTITAGIDIG TGAVKTVLFR VEGDKTEWLG KRNDRIRQRD PFKLAEEAYH ALLEEAGLKA 
SDVDYVATTG EGESLHFHTG HFYSMTTHAR GAVYLNPEAR AVLDIGALHG RAIRNDERGK
VETYKMTSQC ASGSGQFLEN IARYLGIAQD EIGSLSNQAD NPEVVSSICA VLAETDVINM
VSRGITAPNI LKGIHISMAG RLAKLLKSIG AREGVVLCTG GLALDEGLLN TLNESVKEQK
MNVTAFNHPD SPFAGAIGAA LWGAFRHEKL ARLGGQQLAA AA