Gene Tmz1t_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2920 
Symbol 
ID7873822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3161145 
End bp3161885 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID643699841 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_002889896 
Protein GI237653582 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.166338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGCC TGATCTACAC CGCGATGACC GGCGCCAAGG GCACCATGGA CCAGCAGGCG 
GCGGTCGCGC ACAACCTCGC CAACGTCGAC GCCACGGGTT TCCGCGCAGA GTTGCACAAG
CTGCGCGCGG TCGAGGTGCA GACCGAGGCG CTGCGCACGC GCGCCTTCAC GGTCGACGCC
AGCGTCGCCA ACGACTTCAC CGAGGGGCCG CTGCAGTTCA CCGGCCGGCC CTTCGACGTC
GCGCTCGCCG GCAAAGGCTG GCTGGCGGTG CAGATGCCGG ACGGCAGCGA GGCCTACACC
CGCAACGGCA GCCTCGCGGT GAGCGCCAAC GGCGTCCTGC AGACGCGCGA CGGCAGGCCG
GTGCTGGGCG ACGGCGGGCC GGTCACGATC CCGCCCGACA ACGAGATCAC CATCGGTGCC
GACGGTTCGG TCTCGGCCTT GCAGCCCGAT CAGCCGGGTG TGGTCAACGT GGTCGCGCAG
CTCAAGCTGG TGAATCCGCC CGAGGCGCAG CTGGTGCGTG GCGACGACGG CCTCTTCCGC
CTGCAGGGCG GGGCGCCCGC GCCGGTCGAT CCCAATGTGC GCGTCGCCGG GGGCTATCTC
GAGGGCAGCA ACGTCAACGT GGTCGACCAG ATGGTGCAGA TGATCTCGCT CGCCCGTCAG
TTCGAGATGC AGACCCGCAT GCTGTCGACC GCCGAGCAGA ACGACCGCTC GGCCGCGCGG
GTCATCGGCG GCCAGGGCTG A
 
Protein sequence
MDRLIYTAMT GAKGTMDQQA AVAHNLANVD ATGFRAELHK LRAVEVQTEA LRTRAFTVDA 
SVANDFTEGP LQFTGRPFDV ALAGKGWLAV QMPDGSEAYT RNGSLAVSAN GVLQTRDGRP
VLGDGGPVTI PPDNEITIGA DGSVSALQPD QPGVVNVVAQ LKLVNPPEAQ LVRGDDGLFR
LQGGAPAPVD PNVRVAGGYL EGSNVNVVDQ MVQMISLARQ FEMQTRMLST AEQNDRSAAR
VIGGQG