Gene Tmz1t_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2918 
Symbol 
ID7873820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp3159428 
End bp3160105 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID643699839 
Productflagellar L-ring protein 
Protein accessionYP_002889894 
Protein GI237653580 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0212055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG CCAGCCATTC GATCGCCGTC GGCCTGCTCG CGCTGCTGTC GGGCTGCGCC 
GCGATCCAGA CCACCCCGCC GTCTGCGGTG CATCAGCCGA TGAGCGTGCG CCCCGAGGCG 
ATGGCAACCG CGCTGCCCGG CAATGGCGCG ATCTACCAGA CCGTGCAGGC ACGCCCCTTG 
TTCGAGGACC GGCGCGCGCG CCGCATCGGC GACACGATCA CGATCAACCT GGTCGAGCGC 
AACACCGCGG AGAAGAGCGC CAACGCCAAC GCCACCCGCA ACGGCAACAT GAGCGCCGGC 
ATCGGCCCCA TCAACCGCCT GCCCTTGAGC GGCCTGAACG GCCTGGAGCT CGAGGCCGAT 
GCCGAGTCCG ACTTCAACGG CAAGGGCGCG GCCGCGGCCA ACAACGTCTT CAACGGCACG 
ATCACGGTCA CCGTGATCGA CGTCTACCCC AACGGCAACC TGCTGGTGTC GGGCGAGAAG 
ATGGTGGCGA TCAACCAGGG CAACGAGTTC ATCCGCTTCT CGGGCGTGAT CAACCCGAAC 
ACCGTCACCA CCGCCAACAC CGTGCAGTCG ACCCAGGTGG CGGATGCGCG CATCGAGTAC 
CGCGGCAGCG GCTTCATCGA CGAGTCCAAC ACCATGGGCT GGCTGCAGCG CTTCTTCGTG 
GCGATCATGC CGTTCTGA
 
Protein sequence
MKLASHSIAV GLLALLSGCA AIQTTPPSAV HQPMSVRPEA MATALPGNGA IYQTVQARPL 
FEDRRARRIG DTITINLVER NTAEKSANAN ATRNGNMSAG IGPINRLPLS GLNGLELEAD 
AESDFNGKGA AAANNVFNGT ITVTVIDVYP NGNLLVSGEK MVAINQGNEF IRFSGVINPN 
TVTTANTVQS TQVADARIEY RGSGFIDESN TMGWLQRFFV AIMPF