| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2907 |
|---|
| Symbol | fliM |
|---|
| ID | 7873809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3150012 |
|---|
| End bp | 3151022 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643699828 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_002889883 |
|---|
| Protein GI | 237653569 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGG ACTTTCTCTC CCAGGAAGAG GTCGACGCCC TGCTGCGGGG CGTCACCGGC
GAGTCGGACG AGCCGGTCGC GGACGAAGCC GGCGTCGAGG GCGTACGCCC CTACAACCTC
GCCACCCAGG AACGCATCGT GCGCGGGCGC ATGCCCACGC TCGAGCTCAT CAACGAGCGC
TTCGCGCGCT ACCTGCGCAT CGGCCTGTTC AACTACATGC ACCGCAACGC CGAGGTGTCG
GCGGGGCCGA TCAAGGTGCA GAAGTACGCC GAGTTCGTGC GCAACCTGGT GGTGCCGACC
AATCTCAACC TGATCACCGC CAAGCCGCTG CGCGGCACCG GGCTGGTCGT GTTCGACCCC
AACCTGGTCT TCCTGGTGGT GGACAACATG TTCGGCGGCG ACGGGCGCTT CCACACCCGC
GTGGAGGGCC GCGATTTCAC CCCGACCGAG CAGCGCATCA TCCGCGGCAT GCTCGACGTC
GTGTTTGCCG AATACGTGCG CGCCTGGGCA CCGGTGTTCA ATCTGCAGCC CGAGTTCATC
CGCTCGGAGA TGAACTCGCA GTTCGCCAAC ATCGCGACGC CCTCCGAGGT GGTGGTGTCG
ACCAGCCTCT CGGTCGAGTT CGGCGGCTCG CAGGCGGAGA TGCACATCTG CTTCCCGTAC
TCGATGCTGG AGCCGATCCG CGACCTGCTC TATTCCTCGA TGCAGAGCGA CCACCTCACC
TCGGACCGGC GCTGGATCAA GCTGCTGACA CGTCAGTTGC AGACCGCCGA GGTGGAACTC
GCATGCTCGT TCGGCACGGC GCGGGTGAGC CTGCGCGACA TCGTCGACAT GCGCGTCGGC
GATGTGATCC CGCTCGCGGT GCAGCCGGTG CTGCAGGCCG AGGTCGACGG CGTGCCGGTG
TTCGAATGCC GCCAGGGCAC GCGCAACGGG CGCTATGCGC TGCGCGTGGA GCGCTTCATC
ACCGCCGAGG ACAACGAACC CCCCATGATT CCGGGAGCCC AGAATGGCTG A
|
|---|
| Protein sequence | MSADFLSQEE VDALLRGVTG ESDEPVADEA GVEGVRPYNL ATQERIVRGR MPTLELINER
FARYLRIGLF NYMHRNAEVS AGPIKVQKYA EFVRNLVVPT NLNLITAKPL RGTGLVVFDP
NLVFLVVDNM FGGDGRFHTR VEGRDFTPTE QRIIRGMLDV VFAEYVRAWA PVFNLQPEFI
RSEMNSQFAN IATPSEVVVS TSLSVEFGGS QAEMHICFPY SMLEPIRDLL YSSMQSDHLT
SDRRWIKLLT RQLQTAEVEL ACSFGTARVS LRDIVDMRVG DVIPLAVQPV LQAEVDGVPV
FECRQGTRNG RYALRVERFI TAEDNEPPMI PGAQNG
|
|---|
| |