| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2899 |
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| Symbol | fliF |
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| ID | 7873801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3140687 |
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| End bp | 3142402 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699820 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002889875 |
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| Protein GI | 237653561 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00622056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCAG CAGAAAACAC CGCCGACCTG CCTCCGGGCG CCGCCCCCGC CGATGCGCAG
GCGACGACGC GGATGCAGCA GGCGCTGCAG AACCTCGCCG CGCTCAGCAC GCGCCAGAAG
ATCGCCGGCG CGGTCGCCAT CGCGCTGGCG ATCGCGCTCG TGGCCGGCTC CCTGCTGTGG
AACCGCGCCC CGGAGTACGC GGTGCTGTTC TCCAACCTCG ACGAGCGCGA CGGCGGACAG
ATCATCGCCG AGCTGCAGCA GCGCAACATC CCCTACAGGA TGTCGCCCAC CGGCCACGCC
ATCCTGGTGC CGCAGGCGCA GGTGCATGAG ACGCGGCTGC GTCTGGCGGC CGACGGCCTG
CCCAAGGGCA GCCTCGCCGG CTTCGAGCTG ATGGACGGCC AGAAGCTCGG CATCTCGCAG
TTCAACGAGC AGGTGAACTA CCAGCGCGCG CTCGAAGGCG AGCTGACCCG CACCGTGCAG
GCGATCGACG CGGTGGCCAG CGCCCGGGTG CACCTGGCGA TGCCCAAGCA GACCGCCTTC
CTGCGCGACG ACCAGCGCCC CACCGCCTCG GTGATGGTGA ACCTGCGCGG CGGCCGCATC
CTCTCGCCCG ACCAGGTCGC CGGCATCGTG CACCTGGTGT CGTCGAGCGT GCCACGCATG
CACGCCGAGG GCGTGAAGAT CGTGGACCAG AACGGCAAGC TGCTCACCGA GCAGGCCGAC
CCGCTGCTGC GCGCCGGGCT CGACGCCACC CAGCTCGAAT ACGTCCGCCT GCTCGAGCAG
GGCTTCATCG AGCGCATCGA CAAGATCCTC GCGCCCCTGG TGGGCAAGGG CAACTACGGC
GCCCAGGTGG CGGCCGACGT GGACTTCAAC CAGGTCGAGC AGACCGCCGA GACCTACAAG
CCCAACCCCA CACCCGACCA GGCGATCCGC AGCCAGCAGA CCAGCGAGGC CTTCAACCCG
CAGCCGGGCG CGCAGGGCGT GCCCGGCGCG CTCACCAACC AGCCCCCGGT GCCGGCCACC
GCGCCGATCA CCAACCCGCA GGTGGCCGGC GGCGGCGGCG CGCAGGGCCT GGCGAGCGGC
AACCGCAGCG CGGTGCTCAA CTACGAGCTC GACCGCAACA TCCAGCACGT CAAGCAGGCG
GTCGGGCAGA TCAAGCGCCT GTCGGTCGCG GTGGTGGTGA ATAATCGCAC CCTCCCCGGG
CCCGACGGCA CGCCCACCAA CGTGCCGCTG CCCGACGAGG AGATCGCGCG CATCACCAAC
CTGGTGCGCG AGGCGGTGGG CTACAACGCC GACCGCGGCG ACACCATCAA CGTCGCCAGC
GGCGCCTTCG CCGACGACGG CAGCGGAGCC GCACCGCCGC CGTGGAAGGA TCCGGAGATC
GTCGCGCTCG GCAAGGAAGG CCTGAACTGG CTGCTGGTTC TGATCGCGAT CCTGTTCGCC
TACTTTGGCG TGATCCGCCC GCTGCTGCGC ACCGTGGTGC CGCCCAAGCC GAAGGAAGAG
AAGAAGGGCG CCGCCGCGGG CGAGGAAGGC GGGGAAGGCG AAGAGGGCGA GGAAGGCGTG
CGCGTCACCC TGTCCGGCGA GACCGGCGAG GGTGAAGAGA CGGAGACCTT CGAGCAGCGC
CTCGAGCGTG CCCGCGCCGC GGCGCGCAAC GATCCCAAGA TGGTCGCCAA CCTGATCAAG
GACTGGATGG GCATGAACGA GGAGGCGCGC AAGTGA
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| Protein sequence | MAAAENTADL PPGAAPADAQ ATTRMQQALQ NLAALSTRQK IAGAVAIALA IALVAGSLLW
NRAPEYAVLF SNLDERDGGQ IIAELQQRNI PYRMSPTGHA ILVPQAQVHE TRLRLAADGL
PKGSLAGFEL MDGQKLGISQ FNEQVNYQRA LEGELTRTVQ AIDAVASARV HLAMPKQTAF
LRDDQRPTAS VMVNLRGGRI LSPDQVAGIV HLVSSSVPRM HAEGVKIVDQ NGKLLTEQAD
PLLRAGLDAT QLEYVRLLEQ GFIERIDKIL APLVGKGNYG AQVAADVDFN QVEQTAETYK
PNPTPDQAIR SQQTSEAFNP QPGAQGVPGA LTNQPPVPAT APITNPQVAG GGGAQGLASG
NRSAVLNYEL DRNIQHVKQA VGQIKRLSVA VVVNNRTLPG PDGTPTNVPL PDEEIARITN
LVREAVGYNA DRGDTINVAS GAFADDGSGA APPPWKDPEI VALGKEGLNW LLVLIAILFA
YFGVIRPLLR TVVPPKPKEE KKGAAAGEEG GEGEEGEEGV RVTLSGETGE GEETETFEQR
LERARAAARN DPKMVANLIK DWMGMNEEAR K
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