| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2879 |
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| Symbol | |
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| ID | 7873781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3117950 |
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| End bp | 3119773 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643699800 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_002889855 |
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| Protein GI | 237653541 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.62815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC GCGTTGCCGA CTGGCTGCTC GCCCGCCTTG CCGACGAGGG CATCCACCAC
ATCTTCATGC TGCCCGGCGG CGGTGCCATG TACCTCAACG ACGCCCTCGC CTGTGAACCC
CGCGTGAACG CCGTGCCCTG CCACCATGAG CAGGCTGCCG CCATCGCCGC CGAAGCCGCC
GGCCGGACCG GCAACGCCGG CAACCCGGGT TTCGGCGTGG CGATGGTTAC CACCGGCCCC
GGCGCCACCA ATGCCATCAC CCCGGTGGCC GGCGCGTGGA TCGACTCGGT GCCGATGCTG
GTGCTCTCCG GCCAGGCCAA GCGCCCCGAC CGCCTGGGCG GCCGCCCGAT CCGCCAGGGC
GGCGTGCAGG AGGTGGACAT CGTCCCCATC GTCAGTCCGA TCACCAAGTA CGCCGTGACG
CTGGACGACC CACAGTCGGT GCGCGTCCAT CTCGAAAAAG CCCTGCACCT CATGAAGACC
GGCCGCCCCG GCCCGGTGTG GATCGACGTG CCCCTCGACG TGCAGGCCGC GCCCATCGAC
CCGGCCACCC TGCCCGGCTG GACGCCGCCG GCCGACGCCA CCGCACCGAT GCCCGATCTC
ACCCCGGTGC TGACGATGCT CGCCGAGGCC AAGCGCCCGC TCATTCTCGC CGGCCACGGC
GTGCGCCTCG CCGGTGCCGC CGACGCCTTC CGCCAACTCG TGGATCACCT CCAGGTGCCC
GCCGTGCTCA CCTGGAACGC GCTCGACCTG CTGCCCTACG ATCATCCGCT CAACATCGGT
CGCCCCGGCG TGGTCGCCGC CCGCGCTGCG AACTTCGCGG TGCAGAACTG CGACCTGCTG
ATCAGCATCG GCGCCCGCCT CGACATGATC GTCACCGCCT ACAACCCCAA AGGCTTCGCC
CGCGCCGCGC GCAAGGTGGT GGTGGACGTG GACGCCAACG AGCTGGCCGA CAAGACCGCG
ATGGCCATCG ACCAACCCCT GGCGATGGAC GCCGGCGACT TCATCCAAAC CCTGCTGGCC
GCCGCCATAC CCGGCGACAC CACCGACTGG CGCGCCCGCT GCACCCGCTG GAAGGCCCGC
TACACGCAGA ACGAGGGCCG CGTCTTCCCG CCTTCCGGCC CCATCGGCCA CGCCCACTTC
GTCGAGGCCC TGTCAGATGC TGCGCCGGCC GACACTCTTA TTGCCACCGG CAGCTCCGGC
CTGGCAGTGG AGTTCTTCTA CGCTGGTTTT CGCAACAAAC GGGGCCAGCG CACCTTCCTC
ACCTCCGGCC TCGGCGCGAT GGGCTACGGT CTGCCGGCAG CGATCGGCGC CTGCCTCGGC
AACGACCGCA AGCCCATGCT GGCCGTGGAA TCGGATGGCA GTCTGCAGCT CAACCTGCAG
GAGCTTGCCA CCCTCACCGG TCTGCAGCTG CCGATCTGCC TGTTCATCAT GAACAACGGC
GGCTACGCCT CCATTCGCAA CACCCAGCGC AACTACTTCA ATGGGCGCTA CGTGGGCAGC
GGCCCGGCCT CGGGGCTATT CATGCCCGAT CTCGAAAAAC TCGCCGCAGT GTATGGTCTG
CCGTACCTGC GCATCGACGA CTGCGCCGAA CTCGCCGCCG CGCTGGCCCG CGCCCAGGCG
CTGCCGCGCC CCTGCCTCAT CGACGTACGC CTGATTCCGG AAGAGAGCCT GCAGCCCAAG
TGCGCCGCCA TTCCCCGGGC GGACGGCTCC ATCATTTCAA TGCCGCTGGA GGACATGAGC
CCCCTGCTGC CCCTGGAAAC CCTCGAGGCC GAGATGATCG TGCCGCTCCT GCCTGCTTCG
CTCGACGCCC CGCGGCCCGC CTGA
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| Protein sequence | MTIRVADWLL ARLADEGIHH IFMLPGGGAM YLNDALACEP RVNAVPCHHE QAAAIAAEAA
GRTGNAGNPG FGVAMVTTGP GATNAITPVA GAWIDSVPML VLSGQAKRPD RLGGRPIRQG
GVQEVDIVPI VSPITKYAVT LDDPQSVRVH LEKALHLMKT GRPGPVWIDV PLDVQAAPID
PATLPGWTPP ADATAPMPDL TPVLTMLAEA KRPLILAGHG VRLAGAADAF RQLVDHLQVP
AVLTWNALDL LPYDHPLNIG RPGVVAARAA NFAVQNCDLL ISIGARLDMI VTAYNPKGFA
RAARKVVVDV DANELADKTA MAIDQPLAMD AGDFIQTLLA AAIPGDTTDW RARCTRWKAR
YTQNEGRVFP PSGPIGHAHF VEALSDAAPA DTLIATGSSG LAVEFFYAGF RNKRGQRTFL
TSGLGAMGYG LPAAIGACLG NDRKPMLAVE SDGSLQLNLQ ELATLTGLQL PICLFIMNNG
GYASIRNTQR NYFNGRYVGS GPASGLFMPD LEKLAAVYGL PYLRIDDCAE LAAALARAQA
LPRPCLIDVR LIPEESLQPK CAAIPRADGS IISMPLEDMS PLLPLETLEA EMIVPLLPAS
LDAPRPA
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