| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2870 |
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| Symbol | |
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| ID | 7873772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3106097 |
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| End bp | 3108127 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643699791 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002889846 |
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| Protein GI | 237653532 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.360055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGATA ACACGATGCG TGCCGCGCAG GCGGCGGTGG TCGAGTCGCT GCGCAGGCAG
TTTTCCGCCT CCGGCCAGGT GCCCGACGCG GGCCTGCCGG TGCCGGTGCT GCGCTCCTGG
GCGCGCTGCC AGCGCCTGGG ATTGGACATG GGCGAGCGCG TGCGCCCGCC CAGCACCACG
CGGGGCGACC TGATGGTGGC GCGCGAGCGC AGCGCGGCCC TGCTCGCGCA CGCCAGCGGC
GTCATGGAGC ACCTTCACGA ACAGATCCGT TCCTCGGGCA GCATGGTGCT GCTCGCCGAC
GCCAGCGGGA TGATCCTGCA CGGCATCGGC GACCCCGCCT TCGTCGACCG CGCCAACCGC
GTCGCCCTGC AGGCGGGCGC GAACTGGAGC GAATGCGAGC GCGGCACCAA CGCGATCGGC
GCCACCCTGA TCGAGCGTGC GCCGGTCGAG GTGCTCGGCG CCGAGCACTA CCTCGACTGC
AACGGCGTGC TCACCTGCAG CGCGGCGCCG ATCTTCGACT GGCGCGGCGA GCTGCTCGGC
GCGCTCGACA TCTCGGGCGA CCACCGCAGC CACCAGCCCC ACACGCTCGG ACTCGCGCGC
ATGGGGGTGC GCCTGGTCGA ACGCCGCTTG TTCGAGAGCG AACACGCGCG CCATGCGCTG
CTCTCCTTCC ATCCGCGTCC CGAGGGCGTC GGCGGCCTGC AGGAGGGTCT GCTGGCGATC
GATGCGGATG GCGAGATCGT CGCCGCCGAC CGCCAGGCGC GCGCGCTGCT GGGGGTCGAA
GAGCGCCGGG TGGCGGGCCT GGGGAATTTC TCCAACCTGT TCCGGGGCGG CTTCGGCACG
CTGATCGGGC GCGCGGCGCG CGATCCGGCG GCGCTGGTCG AACTCGAGCT GCGTTCGGGC
GCACGCATCC ACGCGCGCCT GCGGCTGAGC CCGGCCTGGC AGGCCGGCGC GCAGTCGGCC
CCGGCCGGCA CGGCCCGCGT TGCCGCCGCC CCCGATCCCT CACGCTCGGC GCGCCACAGG
ACCACCCTCG AGACCCTGTC CACCGGCGAC CCCGCGCTGC AGTTCGTGCT CGACCGCTGC
GCGCGCATCG TCGGGCGCAG CATCCCGATC CTGATCCAGG GCGAGTCCGG CTCCGGCAAG
GAACTCCTCG CGCGCGCCTG CCACAACAGC GGTCCGCGTG CGGATGGCCC CTTCGTCGCG
GTCAACTGCG CGGCCATCCC CGAGAACCTG ATCGAGTCCG AGCTCTTCGG CTACGTCGGC
GGCGCCTTCA CCGGCGCGCG CAAGGAGGGT GCGATCGGCC GCATCCAGCA GGCCCATGGC
GGCACGCTCT TCCTCGACGA GATCGGCGAC ATGCCGCTGG CGATGCAGGC GCGGCTGCTG
CGCGTGCTGC AGGAGCGCTG CGTGCAGCCG GTGGGCGCGG GCTCCGCGGT ACCGGTCGAT
ATCGCGCTGC TGTGCGCGAC CCACCGCCAG CTCGGCGAGC AGGTCAAGGC CGGGCGCTTC
CGCGAGGATC TCTACTACCG GGTCAACGGC CTCGGCGTGC AGTTGCCGCC ACTGCGCGCG
CGCAGCGACC TGCAGGGCAT CGTGCGCCGC CTGCTTGACG GCAGCAGCCA CCACCCCGAG
CCCGCGCGCG TCGACGTCGC GCCGGAGACG ATGGCGATCC TCGCGGCCTA CCCCTGGCCG
GGCAACATCC GCCAGCTGCA GAACGTGCTC GAGGTCGCGC TCGCGTTGCT CGACGAGGGC
GAGACGCGCA TCCTGCCGGT GCATCTGCCC GAGGAAGTGC TGCAGGCGGT CGGCGATGCG
CCGGCGCTCG CCCCGTCGGC AGGGGCCGAA CGCGGCGAGC CGCGTTCCGC GCGGCCCGCC
GACGATCCCG ACCCGCTGCC GCTGCCGCTA CCGCTGCGGC GCGCGCGCGC GCTCGACGAC
GACGCCATCC GCGCCGCGAT CGAGCGCTTC GACGGCAACC TCTCCGCCGC CGCCCGTCAC
CTCGGCGTCG CGCGCAACAC GCTTTATCGG CGGATGGGAC GGCCGTTCTG A
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| Protein sequence | MVDNTMRAAQ AAVVESLRRQ FSASGQVPDA GLPVPVLRSW ARCQRLGLDM GERVRPPSTT
RGDLMVARER SAALLAHASG VMEHLHEQIR SSGSMVLLAD ASGMILHGIG DPAFVDRANR
VALQAGANWS ECERGTNAIG ATLIERAPVE VLGAEHYLDC NGVLTCSAAP IFDWRGELLG
ALDISGDHRS HQPHTLGLAR MGVRLVERRL FESEHARHAL LSFHPRPEGV GGLQEGLLAI
DADGEIVAAD RQARALLGVE ERRVAGLGNF SNLFRGGFGT LIGRAARDPA ALVELELRSG
ARIHARLRLS PAWQAGAQSA PAGTARVAAA PDPSRSARHR TTLETLSTGD PALQFVLDRC
ARIVGRSIPI LIQGESGSGK ELLARACHNS GPRADGPFVA VNCAAIPENL IESELFGYVG
GAFTGARKEG AIGRIQQAHG GTLFLDEIGD MPLAMQARLL RVLQERCVQP VGAGSAVPVD
IALLCATHRQ LGEQVKAGRF REDLYYRVNG LGVQLPPLRA RSDLQGIVRR LLDGSSHHPE
PARVDVAPET MAILAAYPWP GNIRQLQNVL EVALALLDEG ETRILPVHLP EEVLQAVGDA
PALAPSAGAE RGEPRSARPA DDPDPLPLPL PLRRARALDD DAIRAAIERF DGNLSAAARH
LGVARNTLYR RMGRPF
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