| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2844 |
|---|
| Symbol | |
|---|
| ID | 7873252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 3078910 |
|---|
| End bp | 3080931 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643699765 |
|---|
| Product | para-aminobenzoate synthase, subunit I |
|---|
| Protein accession | YP_002889820 |
|---|
| Protein GI | 237653506 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0929877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC CGCCCGCCGT CCCACCGCTC GACCCCGCCT GCTTCGCGCT GCTCGACGAC
TGCCATGCCA CCGGCGCTTC GCCGTCCAGC CGCCTTTATC GTGGCCTGGT GCGCGCGCAT
CGCTGCGCGG ACCCGTCCGC GCTGGAGGCG ACGTGGGCCG CGGTGGACGC CGACCTGCGC
GCCGGCCTGC ACGCGGTGGT GCTGGCCGAC TACGAGTGGG GCGTGCGGCT GAATGGCGTC
GGGCAGGAGG ACGTCGGGCG GGAGAGTAGG GCGCCGGAGG CTTGCGGCCG CTTGGCCGTG
CTGATGTTCG CCACGCTGCA GCACCTTTCG GCCGTCGCGG TCGAGGCCTG GCTGGCGGCG
GCCGAGGCCG GCGGGAGCGA GACGGGCAAG CTCGAGGTGT GTGAGGCGCA GCGCCAGCGC
CGGCCTGCGA TCGGCACATC GGCGACGGCG CCCGATCCCG ACACCGGTCC GGCTCCCGCC
GGCGTGCTCG GCCTGCGCGC CTCGGTCGAT CGCGCGGCCT TCGAGGACGC GATCGCGCGC
ATCCACGCCG CCATCGCCGA GGGCGAGACC TACCAGGTCA ACTACAGCTA CCGCCTGGAT
TTCGACACCT TCGGCTCGCC GCTCGCGCTC TACCGCCGCC TGCGTGCGCG CCAGCCGGTG
GCCTTCGGCG CGCTGATCCG CCTGCCCGCC GACGCCGACG AGGGCGGCCC GGACTGGGTG
CTGTCGTGCT CGCCGGAGCT CTTCCTGCGC CACCACGACG GCGTGCTGCA GGCGCGCCCG
ATGAAGGGCA CTGCGGCGCG CAGCGGCGAC GACGCGGCCG ATGCGCTCGC CGCGCGCAGG
CTCGCGGCCG ACGCCAAGAA CCGCGCCGAA AACCTCATGA TCGTCGACCT GCTGCGCAAC
GACCTCGGCC GCGTCGCGAC CACCGGCAGC GTGCGCGTGC CGGCGCTGTT CGAGGTCGAG
CGCTACCCGA CCGTGCTGCA GATGACCTCC ACGGTCGCGG CGGAGCTGCC CGCGGACGTC
GGCTTTCCCG CGCTGCTGCG CGCGCTGTTT CCCTGCGGCT CGATCACCGG CGCGCCCAAG
CACCGCACGA TGCAGCTCAT CGCCGAGCTG GAGACCGAGC CGCGCGGCCT CTACACCGGC
AGCCTCGGCT GGATCGACGC GCCGCGCCCG GGGCACGCCT GCGGCGACTT CTGCCTGTCG
GTGGCGATCC GCACGCTGAC GCTGGAGCGC ATCGGGCAGG GTGCGGATGC GCTCGCCGGC
GCGCGGCATC GCGGCCGCAT GGGCGTGGGC GCCGGCATCG TGATCGACAG CGCGGCCGCC
GACGAGTACG CGGAGTGCCG GCTCAAGGCG CGCTTCCTCA GCGCGCTCGA CCCCGGCTTC
GCGCTCTTCG AGACCCTGTA CGCGACCCGC GAGGCCGGCG TGCGCAATCT CGACCGCCAC
CTCGCCCGCC TCGAAGCCAG CGCCGCCGCG CTCGACTTCG TGTTCGAGCG CGCACGCATC
GAGGTCGCGC TGGGCGCCCA GCTCGCCGCG CTGCCGCCGG CCACGCCCTC GCGCCTGCGC
CTGGCGCTGC ACAAGGACGG CCGCCTCGAG CTCGCCGCCG CCGCGCTCGA CGCGCTGCCG
CCCGGCGCGG TCACGGTGCT GCTCGCCGAG CGCCCGCTCG ACGACCCGCA GGGCCTCGGC
GCGCACAAGA CCACGCTGCG CGCGCGCTAC GACGAGGGCC TACGCGCCGC GCTGGCCGCG
GGCGCCTTCG ACACGCTGTT CTTCGACTCG GCGGGCCGCC TCACCGAGGG CGCGCGCAGC
AACGTCTTCC TGCTCCTCGA CGGCGAGTGG CGCACCCCGC CCGCCGGCCG CGGCGTGCTG
CCCGGCACGA TGCGCGCCGC GCTGCTGGAG GATCCGTCCT GGGCCGCGCG CGAGGCCGAG
CTGCGCGTGG AGGACCTGCT GCGCGCGCAG CGCATCGTGC TGACGAACGC GCTGCGCGGG
GTGGTGGAGG CGAGGCTGGA GCGCGCCGTC GGCGGTCGCT GA
|
|---|
| Protein sequence | MSAPPAVPPL DPACFALLDD CHATGASPSS RLYRGLVRAH RCADPSALEA TWAAVDADLR
AGLHAVVLAD YEWGVRLNGV GQEDVGRESR APEACGRLAV LMFATLQHLS AVAVEAWLAA
AEAGGSETGK LEVCEAQRQR RPAIGTSATA PDPDTGPAPA GVLGLRASVD RAAFEDAIAR
IHAAIAEGET YQVNYSYRLD FDTFGSPLAL YRRLRARQPV AFGALIRLPA DADEGGPDWV
LSCSPELFLR HHDGVLQARP MKGTAARSGD DAADALAARR LAADAKNRAE NLMIVDLLRN
DLGRVATTGS VRVPALFEVE RYPTVLQMTS TVAAELPADV GFPALLRALF PCGSITGAPK
HRTMQLIAEL ETEPRGLYTG SLGWIDAPRP GHACGDFCLS VAIRTLTLER IGQGADALAG
ARHRGRMGVG AGIVIDSAAA DEYAECRLKA RFLSALDPGF ALFETLYATR EAGVRNLDRH
LARLEASAAA LDFVFERARI EVALGAQLAA LPPATPSRLR LALHKDGRLE LAAAALDALP
PGAVTVLLAE RPLDDPQGLG AHKTTLRARY DEGLRAALAA GAFDTLFFDS AGRLTEGARS
NVFLLLDGEW RTPPAGRGVL PGTMRAALLE DPSWAAREAE LRVEDLLRAQ RIVLTNALRG
VVEARLERAV GGR
|
|---|
| |