| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2823 |
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| Symbol | |
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| ID | 7873231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3052158 |
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| End bp | 3055007 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643699744 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002889799 |
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| Protein GI | 237653485 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.156592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGGC ACGATCGCGA GGACCGCAGC CCCACGCCCC AGCCCCCCGG CCTGGCGACC
GCGCCGGATC GTGCGGCAGC ACACGACGCG CTCGACCAGC GTGCGGACGC CTTCGAGATC
CTCCTCGACG GCGTCGCGGT GCAGGCTTTC CCCGGCGAGA CGCTGTGGAA GGTCGCACTG
CGCGCCGGTG AACGCATCCC CCACCTGTGT TTCAAGGACG CGCCCGGCTA CCGCGCCGAC
GGCAACTGCC GCGCCTGCAT GGTCGAGATC GAGGGCGAGC GCGTGCTCGC CGCCTCCTGC
ATGCGCGCGG CGCAGCCGGG CATGGTGGTA CGCAGCGCCA GCTCGGCGCG GGCACGGCAG
GCGCGCGAGG GTGTGCTCGA ACTGCTGCTC GAACAGCAGC CGGCACGCAC GCACAGCCCC
GACCGCTCCA GCCATTTCTG GGAGCTGGTC GAGCACATGC GTTTGCCCGC CGCCGACCGC
GGCCCCGCAG CGCAGCAGCC GGACCGCACC CACCCCGCGA TCCACGTGAA CCTGGACGCC
TGCATCACCT GCGGCCTGTG CGTGCGCGCC TGCCGCGAGG TGCAGGTGAA CGAGGTCATC
GGCCTCGCCC ACCGCGGTGC ACGCGCGAAG ATCGTCTTCG ACTTCGACGA TGCGCTTGGC
GACAGCAGCT GCGTGGCCTG CGGCGAGTGC GTGCAGGCCT GTCCCACCGG CGCGCTGATG
CCCGCCACCC TGGTCGATGC GCAGGGCCGC GGCGACTCGG CCTGCGCCGA GCGCAAGGTG
GATTCGGTGT GCCCCTACTG CGGCGTGGGC TGCCAGCTCA CCTACCACGT CCGGGACGAG
CGCATCCTCT TCGTCGAGGG CCGCAACGGC CCGGCCAACG AGAACCGCCT GTGCGTGAAG
GGCCGCTTCG GCTTCGATTA CCCCAACCAC CGCGGCCGCC TCACGACGCC GCTGATCCGC
CGCGCGGGCG TGCCCAAGGG CGTGGATCCC GCCTTCGATC CGGCGAATCC GCTCAGCCAC
TTCCGCCCGG CGAGCTGGGA CGAGGCGCTC GACTTCGCCG CCGCCGGCCT GCGCCGCCTG
CTCGACACCC ACGGCCCCGG CGTGCTCGCC GGCTTCGGCA GCGCCAAGTG CTCGAACGAG
GAGGCCTGGC TGTTCCAGAA GCTGGTGCGC ACGGGCTTCG GCTCCAACAA CGTCGACCAC
TGCACCCGGC TGTGCCACGC CAGCTCGGTC GCCGCGCTGA TGGAGTGCAT CGGCTCGGGC
GCGGTCACGG CCTCCTTCAT GCAGGCCGCG CACGCGGACG TGGTCATCCT CACCGGCTGC
AACCCGACGG TGAACCACCC GGTCGCCGCC ACGTACTTCA AGCAGGCCGC CAAGCGCGGC
ACCAGGCTGA TCGTGCTCGA CCCGCGCGGC CTGGTGCTCG GCCACCACGC CCACCGCATG
GTGCGCTTCA CGCCGGGCAG CGACGTCGCG CTCTTCAACG CCATGCTCAA CGTCATCGTC
GGCGAGGGCC TGTGCGACCG CGACTTCATC GCCGCGCGCA CCGAGGGCTT CGAGGCGCTC
GCCGCCCACG TCGCACCGCT CACGCCCGAG GCCATGGCGC CGCTGTGCGG GGTGGCGCCG
GACGAGATTC GCGCCATCGC CCGCCTCTAC GCCACCGCCG AGCGCGCGAT GATCTTCTGG
GGCATGGGCA TCTCGCAGCA TGTGCACGGC ACCGACAACG CGCGCTGCCT GATCGCGCTC
GCGCTCGCCA CCGGCCATGT CGGCCGCCCC GGCACCGGCC TGCATCCGCT GCGCGGGCAG
AACAACGTGC AGGGGGCGTC CGACGCCGGC CTCATCCCCA TGGTGCTGCC CGACTACCGC
CCGGTGGGCG ACGCGCAGTA CCGCGCCGCC TTCGAGGAAC TGTGGGCGAC GCCGCTCCCC
GCCGAGCCCG GCCTCACGGT CGTCGAGACC ATGGACGCGA TTGCCGCCGG CCGGGTGCGC
GGCATGTACA TCCTCGGCGA GAACCCGGCG ATGTCCGACC CCGACCTGCA CCACACCCGC
GCCGCGCTCG CCAGGCTCGA GCACCTCGTC GTGCAGGACC TCTTCGTCAC CGAGACCGCG
CAGTTCGCCG ACGTGATCCT GCCCGCCTCG GCCTGGCCCG AGAAGGACGG CACCGTCACC
AACACCAACC GCCAGATCCA GCTCGGCCGC GCCGCCGTGC CGCTGCCCGG CGAGGCGCGG
CCCGACTGGT GGATCCTCCA GCAGCTCGCC CGCTGCCTCG GCCTCGACTG GCAGTACGCG
CACCCGCGCG AAGTCTTCGC CGAGATGAAG CGGGCGATGC GCTCGCTCGA CCACATCGAC
TGGGCGCGTC TGGAGCGCGA GGGAGCGGTC ACAACCCCTT GCCCGGCCGA GGACGCCCCG
GGCAAGGACG TGGTCTTCGA CGACCGCTTC CCCACCGCGA GCGGACGCGC GCGCTTCCGC
CCCACCGTGC CGCTGCCGCC CGACGAGCCG GTCGACGCCG CCTGGCCCAC GGTGCTGATC
ACCGGCCGCC AGCTCGAACA CTGGCACACC GGCGCGATGA CGCGGCGCAG CGCGGTGCTC
GACGCGCTCG AACCGGCCGC GGTGGCGACG CTGGCCCCGG CCGAACTCAC CCGACTCGGC
CTCGCCCCCG GCGCCGCGCT GAGCATCGAG ACCCGCCGCG GCCGCATCAC GCTCGCCGCC
CGCGCCGATC CGCTGATGCC CGCGGGCATG GTCTTCGTGC CCTTCTGCTA CGTCGAAGCC
GCAGCCAACC TGCTCACCAA CCCGGCCCTC GATCCGTACG GAAAGATTCC GGAGTTCAAG
TACGCTGCGT GCCGGCTCGC GCCCGCATGA
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| Protein sequence | MSRHDREDRS PTPQPPGLAT APDRAAAHDA LDQRADAFEI LLDGVAVQAF PGETLWKVAL
RAGERIPHLC FKDAPGYRAD GNCRACMVEI EGERVLAASC MRAAQPGMVV RSASSARARQ
AREGVLELLL EQQPARTHSP DRSSHFWELV EHMRLPAADR GPAAQQPDRT HPAIHVNLDA
CITCGLCVRA CREVQVNEVI GLAHRGARAK IVFDFDDALG DSSCVACGEC VQACPTGALM
PATLVDAQGR GDSACAERKV DSVCPYCGVG CQLTYHVRDE RILFVEGRNG PANENRLCVK
GRFGFDYPNH RGRLTTPLIR RAGVPKGVDP AFDPANPLSH FRPASWDEAL DFAAAGLRRL
LDTHGPGVLA GFGSAKCSNE EAWLFQKLVR TGFGSNNVDH CTRLCHASSV AALMECIGSG
AVTASFMQAA HADVVILTGC NPTVNHPVAA TYFKQAAKRG TRLIVLDPRG LVLGHHAHRM
VRFTPGSDVA LFNAMLNVIV GEGLCDRDFI AARTEGFEAL AAHVAPLTPE AMAPLCGVAP
DEIRAIARLY ATAERAMIFW GMGISQHVHG TDNARCLIAL ALATGHVGRP GTGLHPLRGQ
NNVQGASDAG LIPMVLPDYR PVGDAQYRAA FEELWATPLP AEPGLTVVET MDAIAAGRVR
GMYILGENPA MSDPDLHHTR AALARLEHLV VQDLFVTETA QFADVILPAS AWPEKDGTVT
NTNRQIQLGR AAVPLPGEAR PDWWILQQLA RCLGLDWQYA HPREVFAEMK RAMRSLDHID
WARLEREGAV TTPCPAEDAP GKDVVFDDRF PTASGRARFR PTVPLPPDEP VDAAWPTVLI
TGRQLEHWHT GAMTRRSAVL DALEPAAVAT LAPAELTRLG LAPGAALSIE TRRGRITLAA
RADPLMPAGM VFVPFCYVEA AANLLTNPAL DPYGKIPEFK YAACRLAPA
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