| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2814 |
|---|
| Symbol | |
|---|
| ID | 7873222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3042701 |
|---|
| End bp | 3043150 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643699735 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_002889790 |
|---|
| Protein GI | 237653476 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.482319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACTC GTACCATCAA GGAGAACCTG CGCAAGCGCC TGGCCATCAC CGCGACCGGG
ATCGCCCTTG CAGCCGCCAG CGCGCTGGCC CATGCCCACG GCGACGTCAC GCCGCAGGCG
GTCGACACGT CCTCGCTCAA GCAGCTCGGC GGGACCTGGG TCACGGTGAA CCCCTACCGC
GGCAACAAGG AGGCGATCCG CATCGGCGAC TCCGCCTTCA ATCAGAACTG CGCGCGCTGC
CACGGCCTCG GCGCGGTCTC CGGCGGCATC GCCCCCGACC TGCGCCTGCT CGACGTCGCC
GACGACGGCA CCGACGAGTT CTTCATCGGC AAGGTGCGCA ACGGTGTCAC CCGCAACGGC
GCGGTCTATA TGCCGCCCTT CGAGGGCATG CTGACCCAGG AGGCCATGTG GGCCATCCGC
GCCTGGCTGG AGACCGTCCA TGAAAACTGA
|
|---|
| Protein sequence | MNTRTIKENL RKRLAITATG IALAAASALA HAHGDVTPQA VDTSSLKQLG GTWVTVNPYR
GNKEAIRIGD SAFNQNCARC HGLGAVSGGI APDLRLLDVA DDGTDEFFIG KVRNGVTRNG
AVYMPPFEGM LTQEAMWAIR AWLETVHEN
|
|---|
| |