| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2813 |
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| Symbol | |
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| ID | 7873221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 3040314 |
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| End bp | 3042413 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643699734 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002889789 |
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| Protein GI | 237653475 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.475478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA TGCAACAGAC CGCGATGGCG CCGGCCGTCC GCGAGGACGC AGTCCGGCTG
GCACGAGGCC AGTTTTTCGG GGAAGGGCGT GCGCCCGAGG CAGGCGTGTC CCCGCTCATC
GTCGACTCGT GGCTGCGTTG CCGCGAGCGC GGAATGGCAG CCGACGACCG CGCCGAAGCC
GAGCATGCGG GTCGCCTGCA GCTGGCGGAG GCGCGCGAAG GCAACCGCGG CCTGCTCGAT
TACGCCAGTG GGGTCATGGA ACACGTGTTC GAGCAGATCC GTGCCTCGGG CAGCCTGGTG
ATCCTGTCCG ATCCGCAGGG CATGATCCTG CACAGCCTGG GCGACGCGGA GTTCGTCGAT
CGGGCGAGCC GGGTGGCGCT GCAGCCGGGC GCGTGCTGGA GCGAGGCGGC GCGCGGCACC
AACGCCATCG GCACGGCGAT CGTGACCGAA GCCCCCACCG TGGTGCTGGG CGGCGAGCAC
TACCTCGACC GCAACGGCTT CCTGTCCTGC ACGGCCGCGC CGATCCGCGA TCCGCGCGGC
GCGCTCGCCG GCGTGCTCGA CGTGTCCTGC GAGCAGCGCA TGCACCAGCG TCACTCGCTC
GGACTGGTAC GCTTGTCCGT GCAGCTGATC GAGAAGCGCC TCTTCGAGGC CGAGTTCGCC
AACCACATCC TGGTCGCCTT CCACGAGCGC CCGGAGTACG TCGGCAGCCT GCAGGAAGGA
CTGGTTGCGG TGACGCCTGA GGGCCACCTG GCCGGTGCCA ACTCGATCGC GCGCGAGTGG
ATCGGGCGTC GCGTCGAGTG CGGAGGTGGG GCCTCGTTCG CGGAGCTGTT CCGCCAGGGG
CTCGGAAAGG TGGTCGACCG GGCGATGAAC TCGAGCGACG CGCTGATCCG GCTGGGACTG
CGCGATGGTT CCGAGATCCA CGTTCAGCTG CGCTCGCTGC GCCCGCGCTT CACCGCCTTC
GGCTCGGCCC AGGCCGGGGA GGGCATGCGC ACGTTTGCCG CGGAATCCAG CCCGGCGGCG
GTCGGCTCCG CACCCCCGGT GTCGGCGCCG GCGCCTGTGT CGGCGCCGCA CGGGCCGATC
ACGCTCCACG ATCTCGCCAC CGGGGACGCG GGTATCGGGC GGGCGGTCGA TCGTGCGCGG
CGCATCCTGG GCAAGGACAT TCCGCTGCTG ATCCAGGGCG AGTCGGGCGT GGGCAAGGAG
CTCTTCGCCC AGGCCTTCCA CAACAGCGGG CCGCGCGCCG ACAAGACCTT CGTCGCGCTC
AACTGCGCCG CGGTGCCGGA GACCCTGATC GAGTCGGAGC TCTTCGGCTA CGTCGGCGGC
GCCTTCACCG GCGCGCGCAA GGAAGGCGCG CTCGGCAAGA TCCAGCAGGC CAACGGTGGC
ACGCTCTTCC TCGACGAGAT CGGCGACATG CCGCTCGGCA TGCAGGCGCG CCTGCTGCGC
GTGCTGCAGG AGCGCTGCGT GACGCCGGTG GGCTCGGTCA AGTCAATCCC GGTCGACATC
TCGCTGGTGT GCGCGACCCA CCGCGTGCTG CGCGATGCGG TGGCGCGCGG CGAGTTTCGC
GAGGACCTCT ACTACCGGGT CAACAGCCTC ACCGTGACCC TGCCCGCGCT GCGCGAGCGC
AGCGACATCC GCTGCATCGT CGAGCGCATC CTGGCCGCGG AGTGCCGCGA GGCCGGGCTG
CAGGGCGTGT GGATCGGCGA CGAGGTCATG CGCTTCGTCG AGCGCCACGG CTGGCCGGGG
AACGTGCGCC AGCTGCAGAA CGTGATCCGC GTCGCGGTCG CGCTGCTCGA CGAGGGCGAG
CGCGAGATCC GGCCCGAGCA TCTGCCCGAG GACCTCTTCC TCGCCGATCC GGTCGACGGT
GGCAAGACGC CGCCGGCGGC CCACGCGGGG CCGCTCGTGG CGGCGGCGAG CGCCGCGCTG
CCGCTGGCGG CCGACGCGCC GCCGATTTCC GCCGCGAAAC GCCTGGACCA GCTCGAGATC
GAGTTGATCG AGCGCGTCAT GCGCGAGGTC GGCGGCAACC TGTCGGCGGC GGCGCGCACG
CTCGGGGTCA GCCGCAACCG CCTCTATCGC AAGCTCGGCC GCGCCGGCGG GGTGTCCTGA
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| Protein sequence | MKVMQQTAMA PAVREDAVRL ARGQFFGEGR APEAGVSPLI VDSWLRCRER GMAADDRAEA
EHAGRLQLAE AREGNRGLLD YASGVMEHVF EQIRASGSLV ILSDPQGMIL HSLGDAEFVD
RASRVALQPG ACWSEAARGT NAIGTAIVTE APTVVLGGEH YLDRNGFLSC TAAPIRDPRG
ALAGVLDVSC EQRMHQRHSL GLVRLSVQLI EKRLFEAEFA NHILVAFHER PEYVGSLQEG
LVAVTPEGHL AGANSIAREW IGRRVECGGG ASFAELFRQG LGKVVDRAMN SSDALIRLGL
RDGSEIHVQL RSLRPRFTAF GSAQAGEGMR TFAAESSPAA VGSAPPVSAP APVSAPHGPI
TLHDLATGDA GIGRAVDRAR RILGKDIPLL IQGESGVGKE LFAQAFHNSG PRADKTFVAL
NCAAVPETLI ESELFGYVGG AFTGARKEGA LGKIQQANGG TLFLDEIGDM PLGMQARLLR
VLQERCVTPV GSVKSIPVDI SLVCATHRVL RDAVARGEFR EDLYYRVNSL TVTLPALRER
SDIRCIVERI LAAECREAGL QGVWIGDEVM RFVERHGWPG NVRQLQNVIR VAVALLDEGE
REIRPEHLPE DLFLADPVDG GKTPPAAHAG PLVAAASAAL PLAADAPPIS AAKRLDQLEI
ELIERVMREV GGNLSAAART LGVSRNRLYR KLGRAGGVS
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