| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2788 |
|---|
| Symbol | |
|---|
| ID | 7873197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3017868 |
|---|
| End bp | 3018308 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643699710 |
|---|
| Product | DNA polymerase III chi subunit HolC |
|---|
| Protein accession | YP_002889765 |
|---|
| Protein GI | 237653451 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2927] DNA polymerase III, chi subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.127703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGC GCGTGCAGTT CTATCACAAC ACCCCCGACC GCCTCGCGCT CGCGCACGAG
CTGGCCGCCG GGGCGCACGC ACGCGGCCGC AAGGTGGCAC TGCGTTGCAC CGACGCGACC
CAGTTGCGCC GACTCGACCA GGCGCTATGG ACCGCGGTGC CGCTCGACTT CGTGCCCCAC
GTCGGCGTCG GGTCGGCGCT GGCCGCGGAG ACCCCGGTGG TGCTGGGCGC AGCCGGCGAG
CCCTGCCCGT GGCCGCACGC CGACATGCTG TTCAACCTCG CCGACGACGT TCCCGCCGAG
GCGGAAGGGT TTCGCATGGT CGTCGAGATC GTCGGCCGCG ACGCCGCCGA AGTGCACGCC
GCCCGCCTGC GCTGGGCCGC CTACCGGCAG CGCGGTTACG AACTGAAGGC CTTCGACGCC
GAACGCAGGG TGGCGCTGTG A
|
|---|
| Protein sequence | MAPRVQFYHN TPDRLALAHE LAAGAHARGR KVALRCTDAT QLRRLDQALW TAVPLDFVPH
VGVGSALAAE TPVVLGAAGE PCPWPHADML FNLADDVPAE AEGFRMVVEI VGRDAAEVHA
ARLRWAAYRQ RGYELKAFDA ERRVAL
|
|---|
| |