| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2699 |
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| Symbol | |
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| ID | 7873441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2922473 |
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| End bp | 2928151 |
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| Gene Length | 5679 bp |
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| Protein Length | 1892 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699622 |
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| Product | YD repeat protein |
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| Protein accession | YP_002889678 |
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| Protein GI | 237653364 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.499088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCGG GTGCCGCACT GCTGGCGGCG CTCTGTATCA CGGCGCTCCC CGGGGTAGCG
GCCGAGACCT CGGCGGCGCA ATCCGGCGCC GCGGATCACG GCATCCAGCA GAGCGGGTGC
GGAATCACGA TGAGCTGTGC ACCGGACTCT GCGCAGGACG GCCCCTCGGC GCCAGAGCCC
CCCGCAGCGG GGCAATGCGT CTCCAACAAC GCGGGCAACC CCTGCGGCAG CGCCAGCGGC
CCGGCCAGCC AGGGTTCCAC CACCGGCCAG GACGTCGGCG CGGGAAACCC GATCGACGTC
CTCTCGGGCA ACAAGTACCA GCAGGAGGTC GATCTTCCGG CGCTGCCAGG CATCCTCGGC
CTCGAGATCG TCCGCCACTA CAACAGCCGA CGTGCGCGCC CGGGCGACAT CGGGGCGCTC
GGCAGCGGCT GGAGACTGTC CTACGAAACG CGCCTGAACA TCCGCGACGA TCGCCTCGAA
ATCCTCCAGG CCGACGGCGC GCGGGTGATC TTTGCGCGCC GGCCCGGTGA GCCGCAGCGC
TGCGCCAGCC GCGACCCCAG CCGCGGCGAC ATCCTGCTCC GGCACCGCCC CGGCGGCGGC
GACGAATATC TCTGGCGCTG GCCCGACGGC CGCAGCCTGC TGTTCGACAG CGCCGGCCAC
CTGGTGCAGA TCCTCGTTGC GAGCGGCGAG TTCGTCTCAC TGCGCCACGA CGCCGCCGGC
CGGCTGCTGC AGGTCACCGA CCCGCAGGGC CGCAGCCTGC AAGTTCACTA CCACGCTCCC
GGCAGCGGCA TCGCCCACAT CGACAGTCCG CTCGGACGCT TCTCGTATGC GCAGGAACGC
GTCGCGCTTC CCGCGCGGAC GGACGCAGGC ACGCAGCCTG GGCGCTCCGT CCACGCTCCG
CAACGCCCGG GCTCCGCCGG CCCGAGCCGC CCCCTGCAGC GCGGCGCTCC CGCCGGAAAG
GCCGCTGCAC CCGCGGTCAC CGCGGCGCGC CTGCTCCGTG TCGACTACCC CGGCGCACCG
GCTGCGCAGA CCGGCGGAGC CGCCGCGCGC GAATATCACT ACGAGGACCC GCGCCATCCG
GTCGCGCTCA CCGGCATCAG CGTGCTCGCG CGTCAGCCCG CAGGCCCGCC CGTGCCCGAA
CGCATCGCCA GCTACGCCTA CGACCACGCC GGGCGCGGCA TCCGCTCGGT GCGTGGCGCG
CTGCCGGCAG GCGGTGAAAG CGGCCCCGAG GACGTGCGCC TCGACTATCC CGAACGCGGC
CGCAGCGTGC TCACCAACAG CCTCGGCCAG CGCACCACCT ACCTTGGCGC GGTGATCGCC
GGCCAGCGCC GCCTGCTCGA AGCGCGCGGC CCGGGCTGCG CGCGCTGCGG CCCCACCGAC
GTCCGCTACC GCTACACGCC CGACGGCCGA TTGAGCGCCA TCACGACCCT GGACGCCGAG
GGCAGGCCGC GCCTTTCCAC CCAGCACCGT TTCGACACCC GCGGGCGCCT CGCCGAGACC
CTCGGTGCCG ATCTCTCCGG CGCCCGGCCG CGCCTGCTCG ACCGCACGCG CTACGAATAT
CCCGACACGC CGGCAACCGC GCTCGCCGAC ACGGACCGCG CAGCGCAACG CACCGAGCCC
GCCGCGACGA CGCCTCCGCG CGCGATCATC CGCCCGAGCG TCGTCCCCGG CCGCGAGCAC
CGCATCGAGC TGCGCTACAA CACGACCGGC CAGCCCATCG AACTGCGCGA GTCCGGTTTC
AGCCCGATCG ACGCGGAAGG CCGGCCGGAT CCCGTGCCGA TCGAACGCCG CGTCACCTGG
CGCTACGCCA CGATCAACGG TCGCAGCGTG CTTGCCGAGC TCGACGGCCC GCTCCCCGAC
GGAGCGGACG CCAGCCCGCT CGACAGCGAC CTCGTCCGCC TGCACTGGGA CGAACGCGGC
AGCTTCATTC GCGCGCTGGA AGGTCCCGGC GGCCAGCGCA GCGAGATCGA ATCCGATCCG
GCCACCGGCC TGCCGCGGCG GGTGCGCGAT GCCGAAGGTC ACGAGACCCA CTTGCGCCAC
GACTCCGCCG GCCAGCTGAT CCGGTGGCGC AGCCGCAGCC CGGGTGAGGC GGCAGATCGC
ATCCACGCTG CCGAATACGA TGCCCTCGGC CAACTCGTCG AGCTGCGCTC CGGAGAGGAT
GAAGAGCGCC TGCATCCGCG CTGGCGGCGC GCCTTCGATG CCGCCGGCCG CCTGAAGTGG
CACGCCGACG CGCTCGGCAT CCTGCGGACC TGGGCCTACG ACCACGAGAG CCGCGTCGTC
GAGACCGGGC TGCGCAGCGC CAGCCGGCTG CTGCGGCGCC GCTGGCGTTA CGACGAGCAC
GGACGCCTCG CCGCGATCGA CGACGACACC GGCTTCACCC GCAGCCTGCG CCACGACGTC
GCAGGCCGGC TCGTCGGCCT CCTGGACAGT CACGGTCGCG AGCTGCTGCC GCCCGCGCGC
CACCCCGACG GCGGATCCGC GCCGCCAGCA CCCCCTGCCC ACCCACGCAT CCTGAAGGAC
GACTTCGGAC GCCCCGTCCT CGAACGCAGT CCCGACGCCG GAGCGCGCTG GCGCAGTTTC
GATGCCGCGG GGCGCCTTGT CGCCATGGGC GACGCCCTCG GCCACCGCGC GCGCTACACC
TGGGACCCGC GCGGCCGCAT CCTCGCCCAG GAGGTCACCG ACGGGCGCAA CGGCAGCACC
GAGACCACCC GCTGGCGCTA CGACGGCTCC CGCCTGCTCG AAGTCGATCA CCCCAAGGGG
CGCGAACGCT ACGAGTACGA CCAGCGCGGC TTGCGCAGCG CGCGCATCGT GAGCCTGAAG
CGCGACGGCG GCGAGCTCGT CGTGGTCACG CGCTACGAGT ACGACGCCGA GGGGCATCTT
GTCGCCACCA CCCTGCCCGA TGGCAGTCGC CTGCGCTACG AGCGCAACGG CCAGGGCCAG
GTCGTCGCGC TGAAGCGCCA GCCGGTGGCC ACGCCCTGGC TGCGCGCGCT GGCGCGCGAA
CAGGTCATCG CCAGCGCGTT CCAGCGCGAT CTCTTCGGCC TGCGTGGCTT CCGGGCCGGC
AACGGCATGC GTACGTTGCA CGAGCGCACG CGCACCGGCA CCTTGGTCCG CGTCGTTCAT
CTGCGCGCCG ACGAGCGCGG CGCACCGGTC CGTAATGCAC GTGCGCTGCT GCCGATCGCA
CCTGGCCAGC CCCTGGCCAC GCGCATCGAA CGCTTGTTCG GCATTTCCGC GGCCCACGCC
GCGCAAGCAA ACACCGATGC GGACGTCACC CAGCCGGTGG AGGCAGCAGA TGGCCAAGCC
CTCGAAGGTG CACTACCACG CCTGCAGGAG ACTGTCGCGT CCGCCGACAC CATCCTGCTC
GACTACCAGT ACGTCTGGGA CCCGGAAGGC AACCTCCTGC ACGCGCGCCG GCGCGAGCCC
GGAGGCCCGC TGCCCTCGAC GCGCCGCAGC CAGGCCTACG ACCTTCGCAA CCAGCTCGTG
GCCAGCGTCG AATGGCGGGA CGACGGCGAC GTGCTGGCCG AAACCGCCGT GTGGCGTTAC
GCCTACGATC GCCACCAGCG CCGCGTCCTT GCCCAGGAAG GCGTCGTGTC GCAGCAGGAG
CTCGCCGGCC ACACCCGCCC GACCCACTTC GCACCGGGCA GCCACCGTGC CTTGTCCTCG
AGCCCACGCG CAGCGAACGT GCCGGCGCGG GCCGCCGCGA GCCGACCGCA CGAGGCCGCC
ACGCCCGGTC ACCACGACGC CAGCGGCCAG CCCGAACGCT TCGGCACGCG CAGCCTGCGA
TGGGACGCAC TCGGCCGCCT GATCGAGGTG CACGCAGGCG ATCGCAGCAT CGCCCGCTAC
GCCTACGACC ACCGCGGCCT GCGCATCGAG CGCACGCGCT TCGATCCCGC AATGGTCGCG
CCCACAACGA CCCACACCGT GTACGACGAC GCCCGCCAAC CCCTCGCAGA GCTCGACGCC
GACGGCAGAT TGATCCGCCA GTATCTGTGG CTAGCCGACC TGCCCCTCGC CGTGCTCGAC
ACCCCGGCGC GCCCCGACAG CGCAACCGAC TCCGCGCGAC GCATCCTCGC AGACCTCGGC
CGCATCGCGC AAAGCTGGCT CGCCCCGCAG GCCGGCCTCG CCTGGCTGCA CACCAACCAC
CTCGGCGCCC CCGAACTGGC CACCGACGCC GACGGCGAGC CGCTCTGGCG CGCGCGCCAC
GCCCCCTTCG GTGCCGCGAC GGTCACCACC TCGCCCCGGC ATCCCGACTT CACCCTCGAC
CTGCGCCTGC CCGGCCAGGT CTTCGACGCC GAAACCGGCC TGCACTACAA CCGCCGCCGT
TACTACGCGC CGACCCTGGG CGAATACCTC ACCCCCGACC CGCTCGGTAC GCCGGACGGG
CCGAACCCGT ATGCGTATGC GGCGTTCAAT CCGCTGCGGA ACGTGGATCC GGATGGGCTG
GTGCTGTTCG CGTTCGATGG GACGGGGAAC AGCGACGACC TCAACGACCC GGCGATGGCG
GGCAGCGGAT TCAGCAATGT GGTGTATTTC TTTGACGCTT ACACTGCCAC CAAGCGCTAT
GTAAGTGGCG TCGGCACCGT GCATCACGAC ATCGACTACG GCGACATCCG CCCGGAAGAC
CACGCGACCG GCCATCTGCT GTGGTGGCTG ACACCGGGCG ATCCGGTCCA TGTGAACGAC
ATGGGCGGCA ACTACTCGGG GCCGGCACGG ATCGGGCGGA TGAGCCAATA CCTGGACGAC
GAGGCCGAGC TCTTCAGTGA CGACCGGGTA ATGGACATCG ACATCGTCGG CTTCAGCCGC
GGCGCGGCCC AGGCGCGCGA GTTCGCCAAC CGGATCGTCG CGAAGACGGT CCGCCATGAG
GGCCAGGACT ACTACCGCTA CACGAACCGC CGCGGAGACT CTGCCTGTCA GGCGGTCGAT
TTCCGCTTCA TGGGGCTCTT CGACACCGTG CTATCGACCA ATTTCAGCGG CGAAGCGTAT
CGCCTCGGGA TCCCGGAGGT CTTCGCCCAT GTTGCGCAGG CGGTCGCGCT CAACGAGCAC
CGCTCGGACT CGATCACGGA GTTCGCCTAT CGCAACCCGA AGCCGCATCG CATGCACTGG
GGCGGCTTTC CGCTCGAGTC GATCGGCGCC AGCAGCGATG CGCCCGGTCG CATCCGCATC
GAGAAGGGCT TCGTCGGCGC CCATGCGGAC ATCGGCGGGG GCTATCCCGA CGCCGAGCAA
GGCCTCTCGC TGGTTGCACT CAACTGGATG GTGGCGCAAG CACGCGACGC CGGGGTAGAA
ATGGAGTCGG TGGCCCCCGT TCCCATCCTT AATGTGGTGA TCCACGACCA GAGCAATGTG
ATCGAGATCG GCAACCCGCA ACACAGCGTC GTTCCGCGCC CGACCGGGAA CGGCGATCTG
CCCCGGATCG ATTACGTCTT CCCCGAGGAC CGCGCGGTCA ACGGCGCGGT GGCCGGAGAT
CGCCAGCGCC GCATGGCGTT CGACAACGGC AGCCTCACCC ACGCCGACAC CCTGCGCTAC
ATCACCTGGC TCCCGCGCGA CGCCACAAGG CGCGGCGACG GCTCCACGCT CGACCCGCGC
CGTCTCGGCG ACGTCACCGG CACGGTGGAT ATGGCGAGCT ACCTCGCCTG GCTCGGGCAG
CCCGAGAACG GCTACACGAC GACAAATGGA GGATTCTGA
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| Protein sequence | MRAGAALLAA LCITALPGVA AETSAAQSGA ADHGIQQSGC GITMSCAPDS AQDGPSAPEP
PAAGQCVSNN AGNPCGSASG PASQGSTTGQ DVGAGNPIDV LSGNKYQQEV DLPALPGILG
LEIVRHYNSR RARPGDIGAL GSGWRLSYET RLNIRDDRLE ILQADGARVI FARRPGEPQR
CASRDPSRGD ILLRHRPGGG DEYLWRWPDG RSLLFDSAGH LVQILVASGE FVSLRHDAAG
RLLQVTDPQG RSLQVHYHAP GSGIAHIDSP LGRFSYAQER VALPARTDAG TQPGRSVHAP
QRPGSAGPSR PLQRGAPAGK AAAPAVTAAR LLRVDYPGAP AAQTGGAAAR EYHYEDPRHP
VALTGISVLA RQPAGPPVPE RIASYAYDHA GRGIRSVRGA LPAGGESGPE DVRLDYPERG
RSVLTNSLGQ RTTYLGAVIA GQRRLLEARG PGCARCGPTD VRYRYTPDGR LSAITTLDAE
GRPRLSTQHR FDTRGRLAET LGADLSGARP RLLDRTRYEY PDTPATALAD TDRAAQRTEP
AATTPPRAII RPSVVPGREH RIELRYNTTG QPIELRESGF SPIDAEGRPD PVPIERRVTW
RYATINGRSV LAELDGPLPD GADASPLDSD LVRLHWDERG SFIRALEGPG GQRSEIESDP
ATGLPRRVRD AEGHETHLRH DSAGQLIRWR SRSPGEAADR IHAAEYDALG QLVELRSGED
EERLHPRWRR AFDAAGRLKW HADALGILRT WAYDHESRVV ETGLRSASRL LRRRWRYDEH
GRLAAIDDDT GFTRSLRHDV AGRLVGLLDS HGRELLPPAR HPDGGSAPPA PPAHPRILKD
DFGRPVLERS PDAGARWRSF DAAGRLVAMG DALGHRARYT WDPRGRILAQ EVTDGRNGST
ETTRWRYDGS RLLEVDHPKG RERYEYDQRG LRSARIVSLK RDGGELVVVT RYEYDAEGHL
VATTLPDGSR LRYERNGQGQ VVALKRQPVA TPWLRALARE QVIASAFQRD LFGLRGFRAG
NGMRTLHERT RTGTLVRVVH LRADERGAPV RNARALLPIA PGQPLATRIE RLFGISAAHA
AQANTDADVT QPVEAADGQA LEGALPRLQE TVASADTILL DYQYVWDPEG NLLHARRREP
GGPLPSTRRS QAYDLRNQLV ASVEWRDDGD VLAETAVWRY AYDRHQRRVL AQEGVVSQQE
LAGHTRPTHF APGSHRALSS SPRAANVPAR AAASRPHEAA TPGHHDASGQ PERFGTRSLR
WDALGRLIEV HAGDRSIARY AYDHRGLRIE RTRFDPAMVA PTTTHTVYDD ARQPLAELDA
DGRLIRQYLW LADLPLAVLD TPARPDSATD SARRILADLG RIAQSWLAPQ AGLAWLHTNH
LGAPELATDA DGEPLWRARH APFGAATVTT SPRHPDFTLD LRLPGQVFDA ETGLHYNRRR
YYAPTLGEYL TPDPLGTPDG PNPYAYAAFN PLRNVDPDGL VLFAFDGTGN SDDLNDPAMA
GSGFSNVVYF FDAYTATKRY VSGVGTVHHD IDYGDIRPED HATGHLLWWL TPGDPVHVND
MGGNYSGPAR IGRMSQYLDD EAELFSDDRV MDIDIVGFSR GAAQAREFAN RIVAKTVRHE
GQDYYRYTNR RGDSACQAVD FRFMGLFDTV LSTNFSGEAY RLGIPEVFAH VAQAVALNEH
RSDSITEFAY RNPKPHRMHW GGFPLESIGA SSDAPGRIRI EKGFVGAHAD IGGGYPDAEQ
GLSLVALNWM VAQARDAGVE MESVAPVPIL NVVIHDQSNV IEIGNPQHSV VPRPTGNGDL
PRIDYVFPED RAVNGAVAGD RQRRMAFDNG SLTHADTLRY ITWLPRDATR RGDGSTLDPR
RLGDVTGTVD MASYLAWLGQ PENGYTTTNG GF
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