| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2693 |
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| Symbol | |
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| ID | 7873435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2916346 |
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| End bp | 2917785 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699616 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002889672 |
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| Protein GI | 237653358 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000595981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGGA CTGACCCGAT CTCCCCGCCG GCGCGCCGGC GGGCGCTCCC TCCCCTCGTG
TGCGCAATCC TGATCCTGGG CCTGCCCGGC CCGAGCCGCG CCGCTCCGCC CGCAAGCGCC
GCGCCGCCGG AACCTGGGCG CGCAGCGCTC GCGGTCGTCC ACGAGATCCA GATGTTCGCC
GGCGAAACCC GGGTGCTGCC GCAGCGCGAC GCGCAGCGCC TCGCCGTCGG CGACGCCAAG
GTGCTCTCCG CGGCCGTGCT CGACGACCGC GAGATCCTGT TGATCGCCAA CGGCCCGGGC
GACACCATGC TGCAGGTGTG GACCCGCTCG GGCCGCAGCC AGCGCATCAA GATCACCGTC
CGCCAGACCG ACACCGCCCG CATCGCACGC GACCTGCAGG GCTTCCTGCA CGACGTCCCG
CGGCTGCGCA CGCGCACCAT CGGCGACAAC GTGGTCATCG AGGGCGAGGG CCTGAGCGAC
GCCGAACGCG ACAAGGTCAC CGAGCTCGCC AAGCGTTTCC CGCAGCTCAT CGACTTCACC
AGCCGCGTCG GGCTCGACCG CATGTTCGCC TTCGACGTGC GCTTCGTGGA GATCAGCCGC
AGCGGCCTGC GCGACCTCGG CATCGACTGG ACCACGCAGG GCAAGCCGCT GCTCGGGATC
GGCGTGATCG GCGACCTGTA CCACGACAAC CGCACCGGGG CGACCGTGAC GCGCACGCTC
GGCAGCGGCG AACTGAGCTC CGAGGTCGAG ATCGAGGCGA ACCGCGTCTC GCCCTTCGCC
GCCAACGTGG CCCTGGTCGG CAGCTTCTTC GGCCGCCTCA ACCTGCTCGC GCAGAAGGGC
GACGCGGTCA TCCTCGCCTC GCCGCGACTC TCGGCGCGCA ACCGCGGCGA AGCGAGCTTC
CTCGCCGGCG GTGAAATCCC CGTCCCGGTC GCCTCCGCCA CCGGGACGCC GAGCGTGACG
TTCAAGGAAT ACGGCATCCG CCTCAACATC CTCGAACCGG TCGCCGACGC CGCCGGAACG
ATCCGCGCGC GCATCCGCAC CGAAGTCAGC TCGCTCGACC GCAGCGTCGC CGCCCAGGGC
GTTCCCGGCC TGCTCTCGCG CCGAACCGAG ACCGAGTTCA ACCTGCGCAA CGGCGAGACC
CTGGTGCTCT CCGGGGTGCT GCAGCGCGAA CAGCAGAGCG ACGAGAATGC GCTCCCGCAT
TTGGGTGAGC TCCCGGTAAT CGGTCGACTG TTCCGGTCCA CCCGGTTCAA CAGCCGCGAA
AGCGAACTCG TGGTCTTCGT CACCCCCTGG CTGCTCGAGC CCGGCGAAGG CCTTCTGGAT
CCGCGCGCGC AACTGCTCGA ACGCCGTGCC GAGCAGGCCC TCGCCCCCGC GCCCGAACCC
TCGCCGGCGC TGCGCGAGCC CGCGGATCCC GCGTGGAACG CCCTCTACGG CGGCAACTGA
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| Protein sequence | MTRTDPISPP ARRRALPPLV CAILILGLPG PSRAAPPASA APPEPGRAAL AVVHEIQMFA
GETRVLPQRD AQRLAVGDAK VLSAAVLDDR EILLIANGPG DTMLQVWTRS GRSQRIKITV
RQTDTARIAR DLQGFLHDVP RLRTRTIGDN VVIEGEGLSD AERDKVTELA KRFPQLIDFT
SRVGLDRMFA FDVRFVEISR SGLRDLGIDW TTQGKPLLGI GVIGDLYHDN RTGATVTRTL
GSGELSSEVE IEANRVSPFA ANVALVGSFF GRLNLLAQKG DAVILASPRL SARNRGEASF
LAGGEIPVPV ASATGTPSVT FKEYGIRLNI LEPVADAAGT IRARIRTEVS SLDRSVAAQG
VPGLLSRRTE TEFNLRNGET LVLSGVLQRE QQSDENALPH LGELPVIGRL FRSTRFNSRE
SELVVFVTPW LLEPGEGLLD PRAQLLERRA EQALAPAPEP SPALREPADP AWNALYGGN
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