| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2682 |
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| Symbol | |
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| ID | 7873424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2906391 |
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| End bp | 2908763 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699605 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002889661 |
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| Protein GI | 237653347 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGCG CCGCCTTCGC GCTGCTGCTG CACACCTCGA GCAGCATCCG CCTGCTCGTG
CTCGCGCTGA TCGGCCTCGC CGGGCTGGGG TGGTTCGTGG TCGAGGCCGG CACCAGCTCG
GCACGCGAGC ACCTGCGCTA CGCCCGCGAC CTGCGCGAGA TCCGCCAGGT CGATGCCGAG
CTCGGCGCCG CCGCGCTCGC CCGCCGGCTC GGGCTCGCCG AGGACTGGCA CGGGGCCGAC
GCCCACCTGG CGCGGATGGG TGAACTCCTC GAAGACCTCG GCCGCGTTCC CGACTTCCTC
ACCGGCAGCG AGATGGCGGC CGTGCGCCGC CAGCTCGATC ACTACACCGC CCTGCAGATC
GACAAGCGCA CCGTGATCAG CGCGCTGCGC GTGCTCCTCG ACGCGCCGCC GCAGAACGGC
GGCGCGGCCG AAGCCGAGGC CGACCGCCTC CTGCGCCAGC TCCTCGCGCT GCAGACCGCA
CGCGAGGGCG AGCGCCTGGT GGAGAGCTAC ACCGACGGCT ACGTCGCCTC GCAAACCCGC
ATGAACCGCC ACCGCGTGCT GCTGGTGCTC GCCGCGCTCG CGCTCGGCGC CTACCTGCTG
CTCACCGCGC TGCGACTGCG CGCGGTCTCG CTCACTGTCA GCAAGGCGCA TGCCGACCTG
CAGGAACACG CCGCTGCGCT CGGCCGTGCC GAAGCCGAGC TGCGCCTGTA CGCCACGGTG
TTCACCAACG CCAGCGAGGG CATGCTGATC ACCGATGCGC ACAGCCGCAT CATCGCCGCC
AACCCGGCCT TCTCCCGCAT CACCGGCTAC AGCCCGGCGG AGGTCGCGGG GCGCTCGCCG
GCGCTGCTGA ACTCCGGGCG GCAGGACGCC GGCTTCTACC GGCGCATGTG GTCCACGCTC
GCCAGCCGCG GCAAGTGGCA GGGCGAACTG TGGAACCGCC GCCGCGACGG CTCGATCTAT
CCCGAGTGGC TGTCGATCAC CGCGGTGCCG GGCGAGGGCG AGGGGGCGGA CGGACAGCCG
TGCAACTACA TCGGCATCTT CTCCGACATC ACCGAACGCA AGGAGGCCGA AGCGCGCATC
CTGCACCTCG CCCACCACGA CCCGCTCACC AACCTGCCCA ACCGCGCGCT GCTCAACGAC
CGCCTGAGCC AGAGCCTGCT GCAGGCACGG CGCGACGGCC GCGGCGCCGC GGTGCTGCTG
CTCGACCTCG ACCGCTTCAA GACGATCAAC GACACCCTCG GCCACGAACG CGGGGACAGT
CTGCTGCTGG AGATCTGCGC ACGCTGCCGG CGCGTGCTGC GCGACACCGA CACGCTTGCC
CGCCTGAGCG GGGACGAGTT CGTCATCGTG CTGCCCGACG CCACCACCGC CGACGTCAGC
GCAGACACCG CGCGCAGGAT CCTCGACGCC ATCGCCCTAC CCTGCCGGCT GGGCGAGCAC
GAGATCAGCA TCACGGCGAG CATCGGCATC GCCCTCTTCC CGCGCGACGG CGGCGACGAA
TCGACCCTGT TGCGCAACGC CGACGCCGCC ATGCATCGCG CCAAGGAGGC CGGACGCAAC
GGTTTCGAGT TCTACACCGA GGACATGAAC ACCAGTTCGC TCGGCCGCCT GTTGCTCGAA
CACCAGCTGC GCGGCGCCGC CGAGCGCGGC GAGCTGCTGC TGCACTACCA GCCCAAGGTG
AGCGCCGCCG ACGGCCGCCT CGGCGGCTTC GAGGCGCTGC TGCGCTGGCA GCATCCCGAA
CTCGGCATGG TCGCGCCCGG CCAGTTCATC CCGCTCGCCG AAGAATCGGG CCTGATCGTG
CCGATCGGCC AGTGGGTGCT CGAGGAAACC TGCCGCCAAC AGCGCGCCTG GCTGGACGCC
GGTTTCGACG TGCCGCCGCT CGCGGTGAAC CTCTCGGCGC ACCAGCTCGC CCAACCCGAC
ATCGTCGCAA CCGTGGCGGC GGCCATCGAG TGCCACCGCC TCGCGCCCGG CCTGATCGAG
CTCGAGCTCA CCGAGACCAT GCTGATGCGC GACGTCGATC GCACCATCCG CACCCTCGTG
CGCCTGCGCG AGATGGGCGT GCGCCTGGCG ATCGACGACT TCGGCACCGG CTACTCCTCG
CTCAACTACC TGCGCCAGTT CCCGGTCAAT GCGCTGAAGA TCGACCGCAG CTTCGTCAGC
GACATCGGCA GCGACGGCGC CGAGGGCAAG ATCGCCGCAG CCATCGTCGG CATGGCCCAC
AGCCTGGGGC TGGACGCGGT CGCCGAAGGC GTGGAGAGCG AGGCCCAACG CGCCTTCCTG
CAGATGCACG GCTGCCATCA GTTGCAGGGC TTCCTGATCG CCCGCCCGGC GCCTGCGCGC
GAAATCGAGC GCTTCCTGAG CCGGCGCGCC TGA
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| Protein sequence | MTRAAFALLL HTSSSIRLLV LALIGLAGLG WFVVEAGTSS AREHLRYARD LREIRQVDAE
LGAAALARRL GLAEDWHGAD AHLARMGELL EDLGRVPDFL TGSEMAAVRR QLDHYTALQI
DKRTVISALR VLLDAPPQNG GAAEAEADRL LRQLLALQTA REGERLVESY TDGYVASQTR
MNRHRVLLVL AALALGAYLL LTALRLRAVS LTVSKAHADL QEHAAALGRA EAELRLYATV
FTNASEGMLI TDAHSRIIAA NPAFSRITGY SPAEVAGRSP ALLNSGRQDA GFYRRMWSTL
ASRGKWQGEL WNRRRDGSIY PEWLSITAVP GEGEGADGQP CNYIGIFSDI TERKEAEARI
LHLAHHDPLT NLPNRALLND RLSQSLLQAR RDGRGAAVLL LDLDRFKTIN DTLGHERGDS
LLLEICARCR RVLRDTDTLA RLSGDEFVIV LPDATTADVS ADTARRILDA IALPCRLGEH
EISITASIGI ALFPRDGGDE STLLRNADAA MHRAKEAGRN GFEFYTEDMN TSSLGRLLLE
HQLRGAAERG ELLLHYQPKV SAADGRLGGF EALLRWQHPE LGMVAPGQFI PLAEESGLIV
PIGQWVLEET CRQQRAWLDA GFDVPPLAVN LSAHQLAQPD IVATVAAAIE CHRLAPGLIE
LELTETMLMR DVDRTIRTLV RLREMGVRLA IDDFGTGYSS LNYLRQFPVN ALKIDRSFVS
DIGSDGAEGK IAAAIVGMAH SLGLDAVAEG VESEAQRAFL QMHGCHQLQG FLIARPAPAR
EIERFLSRRA
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