| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2654 |
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| Symbol | |
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| ID | 7873395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2875124 |
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| End bp | 2878879 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643699577 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002889633 |
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| Protein GI | 237653319 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.256644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGGCT TGAGGATCGA GTCGTCGGTG GAGGTGCCCG CCCGGGCAGG ACATGGGGAT
GTGCCGCCGG CGCCACCGCC CGCATCCGTC GCGCTCGCCG ACCTCGAGCG TCGCGTGGCG
CGCCAGGCGC AGATGCTGTC GGTGCTGTCC ACGCTGCAGC GCGGCATGCT CGTGGGGCGT
TCGTCCGCCG ACACCTTCTC CGCGATGCTC GACCAGCTGG TGGCCTTGAC CGGCAGCGAG
TACGGCTTCA TCGGCGAAGT GCTGCACGAC GAGGCCGGCG AGTCCTTCCT GCGCATGCAC
GGACTCAGCG ACATCTCCTG GAGTCCCGAG TCGCGCGCCC TGTTCGAACG CATGCGCACC
GGCGGTTTCG AGTTCCACAA CCTCGACACC TTGTTCGGTT CGGTGGTGAG AACCGCCACG
CCGGTGATCT GCAATGCGCC CGCGGGCGAT CCCCGCGGCG CAGGGGTGCC GCCCGGCCAC
CCCGAGCTGC GCGCCTTTCT CGGCCTGCCC TTGTTCCACG GCGGGCAGCT GATCGGCATG
GTCGGCCTGG CGAACGCGGC GCAGGGTTAC GACCACGCCC TGATCGTCGA GCTGGAGCCG
ATGCTGGTCA CCTGCGCGAG CATGATCATC GCGCTGCGCA CCGAGCAGGA CCGCAAGGCC
GCACGTCGCG CCCTGGAGGA GAGCGAACGC CATTTCCGCG AGCTCGCCAA CAGCAAGTCG
GCGCTGATCT GGACCTCGGA CGCGGACGGC GGATGCAACT ATTTCAACGA CACCTGGCTG
CAGTTCACCG GCCGCACGCT GGAACAATCG CAAGGCACGG GCTGGGTGGC CGACGTGCAT
GCGGACGACC TGGAGGGCTG CCTCGACGCC TGGCAACGAG CCTTCGCCCG CCGCGAGTCC
TTCCGCATGG AATACCGCCT GCGCCACGCC GCGGGCGGCT ACCGCTGGAT TTCGGACGAG
GGCAATCCGC GCCGCGACGC GGACGGCGCC TTCGTCGGCT ACATCGGCTA TTGCTACGAC
ATCACCGAGC GCAAGCGCGG CGACCTCGCG CTCGATGCGC TCGCGGCGCG CTACGCGCGG
CTGTCGGGCG AGGGCTTCTA CGAGGCCGTG TGCCGGCACA TCGTCGAGGC GCTCGATCTG
GACATCGCCT TCGTCGGCCA GCTGTGCGCG GACGGCGCGC ACATCGAGGT GCGCGCGGGC
TGGGGCGAGG GCGCAGCGAT CGGGCCGTTC CGCTATGCCC TTGCCGACTC CCCCTGCGAT
GGCACGATCG GGCTGGGCGC CTGCATCTAC CCGCGGGGGG TGCATGCGCG CTTTCCGCGC
GACCGCGAAC TCGTGCGCAT GGGCATCGAG GCCTACGCCG GCATGCCGCT ATTCGATCGC
GATGGCGGCG TGCTCGGCCT GATCGTCGCG CTGCGTCGCC GCCCCTTCGA CGACGAGGCG
GCGGTACGCA CCCTGCTGGA GATCTTCGAC GACCGCGTCG CGGCCGAGCT GGCGCGCGAG
CGCGCGGAGC GCGTGCTGAA CGGACGGATC GCCTTCGAGC GCCTGGTCGG GCGGATCTCG
TCCGATCTGA TCCTCGCCTC GCCGGCCGAG CTCGACCTTC ATCTCCATCG GGCGCTCGGC
GAGCTCGGGC GCTTCGCCGA GGCGGATCGC GCCTACGTGT TCCAGGTGTC CGAGGACGGT
TCCCTGCTCG ACAACACCCA CGAGTGGTGC GCCGAGGGCG TCGAGCCGCA GATCCACAAG
CTGCAGGGCT TGCCCTTCGA CGACTCGCTG CTCTTCCTGC GCACGATCAA GCAGCTCGGG
ATCGTCGATT ACCCCAGCGT CGCCGCGCTG CCGTCCGAGG CCGAGGCCGA CCGCGTGCTG
CTCGGGGCGC AGTCGATCCG TTCGGTGCTT GGCGTGCCGA TGGTCGTGGA CGGCCAGGTG
CGCGGCGTCA TCGGGCTCGA CGCGGTGCGC AGCGAGCGCA CCTGGACCGA CGAGGACAAG
ACCCTGATGA CCCTGGTGGG CAACGCCTTC AGCGGGGTCA TCGAGCGCAA GCGCGCCCAC
GACGGCCTGC AGGCGAGCGA GGCGCGCTAC CGCTCGGTGG TCGAGAGCGT GCGCGAGGTG
ATCTTCCAGC TCGACGGGCG AGGGCGCTGG ACCTTTCTCA ACAAGGCGTG GGCCGACATC
ACCGGCTACG CGCTCGCGGA TAGCCTCGGC CGCCACTTCC TCGCCCACGT GCACGCGGAC
CATCGCGACC AGCACGGCGA GATGATCGAG CAGGTGCTTG CAGGCGAGCT CGAGTCCTGC
ACCCACGCGG CACGCTACCG CTGCGCCGGC GGCGGATTCC GCTGGCTGGA GATGAGCGCG
CGGCGCGCGT TCGACGCGCA AGGCCGGCCC GCGGGCCTTT CCGGGACGCT GACCGACATC
ACTCAGCAGA AGGAGCACGA GTCGCGCCTG GAATACATCG CGCATTACGA CGCGCTCACC
GGGCTGCCCA ACCGCGTCCT GCTCAGCGAC CGCATGCAGC GCGGGATGGC GCAGGCGCGC
CGGCGCGGTC AGCAGCTCGC GCTCGCCTAC ATCGATCTCG ACGGCTTCAA GGCCATCAAC
GATACCCTCG GCCACCAGGC CGGCGACCAG TTGCTCGCGG TGGTGGCGGC GCGCATGAAG
GCGGCGCTGC GCGAGGGCGA CAGCATTTCG CGCCTGGGGG GGGACGAGTT CGTCGCCCTG
CTGCTCGACC TGCCCGATGT AGAGGCTTGC GAACTGCTCG TGCGCCGCCT GCTCGGCGCG
GTCTCGCAGG CGGTCCAGCT TGCGGGGCAG GAGGTGAAGG TCTCGGCGAG CATCGGCCTG
ACCCTGTACC CGCAGGCGGA GGAGGTCGAC GCCGACCAGT TGCTGCGCCA GGCCGACCTC
GCCATGTACC AGGCCAAGCT CGCCGGCAAG AACCGCTACC ACCTCTTCGA CACCGCGCAC
GACCGCTCCC AGCGCGGGCG CCACCAGACC CTGGCGGCGA TCCGTGGCGC GCTGCGCACG
GGCGAGTTCC GCCTCCTGTA CCAGCCCAAG GTGAACATGC GCAGCGGTGC GGTGGTGGGT
GCCGAGGCGC TGATCCGCTG GCGGCATCCG CGCCAGGGCG AACTCGAGCC GGGCGGCTTC
CTGCCCGTGG TGGCGGACCA CCCGCTCGCG GTCGAGATCG GCGACTGGGT GATCGAACAG
GCGCTCGCCC AGGTTGCCGC CTGGCAGCAC GCGGGATTGT TCCTGCCGGT GAGCGTGAAC
GTGGGCGCGC GTCACCTGCA GGCGGCGGAT TTCATGCCGC GCCTGCAGGC GGCGCTGGCG
CGCCACCCCG ATCTGGGGCC GGGCGCGCTG GAACTGGAGG TGCTGGAGAC GAGCGCGCTG
GAGAGCATCG CCCAGGTCAC GCGCATCGTC GAGGCGTGCG CACGCATCGG CGTGTCCTTC
GCGCTCGACG ACTTTGGGAC GGGGTATTCC TCGCTCGCCT ATCTCAAGCG GCTACCCGCG
GCGCGTCTCA AGATCGACCA GCTGTTCGTG CGCGGGATGG TGGAGGACGC CGAGGACCTC
GCCATCCTGA AGGCGATCAT GGGGCTGGCC GATGCCTTCA AGCGCGAGGT GATCGCCGAG
GGGGTCGAGG AGGTCGAGCA CGGCAGCCTC TTGCTGCAAC TGGGCTGCGA GGTGGCGCAG
GGCTACGGGA TCGCGCGGCC GATGCCGGCG GAAGAGATTC CGGCCTGGGT GGCGAACTGG
TCGCCGCCCT CGGCGTGGCG GCAGGCGCGG GCCTGA
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| Protein sequence | MSGLRIESSV EVPARAGHGD VPPAPPPASV ALADLERRVA RQAQMLSVLS TLQRGMLVGR
SSADTFSAML DQLVALTGSE YGFIGEVLHD EAGESFLRMH GLSDISWSPE SRALFERMRT
GGFEFHNLDT LFGSVVRTAT PVICNAPAGD PRGAGVPPGH PELRAFLGLP LFHGGQLIGM
VGLANAAQGY DHALIVELEP MLVTCASMII ALRTEQDRKA ARRALEESER HFRELANSKS
ALIWTSDADG GCNYFNDTWL QFTGRTLEQS QGTGWVADVH ADDLEGCLDA WQRAFARRES
FRMEYRLRHA AGGYRWISDE GNPRRDADGA FVGYIGYCYD ITERKRGDLA LDALAARYAR
LSGEGFYEAV CRHIVEALDL DIAFVGQLCA DGAHIEVRAG WGEGAAIGPF RYALADSPCD
GTIGLGACIY PRGVHARFPR DRELVRMGIE AYAGMPLFDR DGGVLGLIVA LRRRPFDDEA
AVRTLLEIFD DRVAAELARE RAERVLNGRI AFERLVGRIS SDLILASPAE LDLHLHRALG
ELGRFAEADR AYVFQVSEDG SLLDNTHEWC AEGVEPQIHK LQGLPFDDSL LFLRTIKQLG
IVDYPSVAAL PSEAEADRVL LGAQSIRSVL GVPMVVDGQV RGVIGLDAVR SERTWTDEDK
TLMTLVGNAF SGVIERKRAH DGLQASEARY RSVVESVREV IFQLDGRGRW TFLNKAWADI
TGYALADSLG RHFLAHVHAD HRDQHGEMIE QVLAGELESC THAARYRCAG GGFRWLEMSA
RRAFDAQGRP AGLSGTLTDI TQQKEHESRL EYIAHYDALT GLPNRVLLSD RMQRGMAQAR
RRGQQLALAY IDLDGFKAIN DTLGHQAGDQ LLAVVAARMK AALREGDSIS RLGGDEFVAL
LLDLPDVEAC ELLVRRLLGA VSQAVQLAGQ EVKVSASIGL TLYPQAEEVD ADQLLRQADL
AMYQAKLAGK NRYHLFDTAH DRSQRGRHQT LAAIRGALRT GEFRLLYQPK VNMRSGAVVG
AEALIRWRHP RQGELEPGGF LPVVADHPLA VEIGDWVIEQ ALAQVAAWQH AGLFLPVSVN
VGARHLQAAD FMPRLQAALA RHPDLGPGAL ELEVLETSAL ESIAQVTRIV EACARIGVSF
ALDDFGTGYS SLAYLKRLPA ARLKIDQLFV RGMVEDAEDL AILKAIMGLA DAFKREVIAE
GVEEVEHGSL LLQLGCEVAQ GYGIARPMPA EEIPAWVANW SPPSAWRQAR A
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