| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2645 |
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| Symbol | |
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| ID | 7873386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2857295 |
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| End bp | 2860576 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699568 |
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| Product | diguanylate cyclase/phosphodiesterase with Chase sensor |
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| Protein accession | YP_002889624 |
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| Protein GI | 237653310 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAA GCCCTCTCCC CGCAGTCGTC CTCGCCCTGG CCTATTGGGC GGTCGGCTAT
CCCGCCCTCC ATCTCGCCAT CCCACCGGGC TACACCGCCC CCTTCTTTCC ACCGGCCGGT
ATCGCACTCG CCGCGCTGTT CGTGTTCGGA CTGCGCCTGT GGCCTGCGGT GTTCGCAGGG
TCGGCCCTGG TCCAGCTCGC CACCGCCTGG CCGCTGCTCG GCAGCGCAGG CTGGAATCCG
CTCGGTCCGC TCGCCGTCCC GATAGGCGCC ACCCTGCAGG CGGTGGTCGG CGTCCTGCTC
GCGCGCCGGC TGCTCGCGCC CGGCGACACG CTCGACACGG CCGGCTCGGT GATGCGCTTC
CTCGGCATCT GCATGCCGCT GAGCGGGCTG GTGTGCTCGA CGATCGGCGT CTCCGCCCTG
GTCTGGGCGG CGGTGATCCC GGCATCCGAC GCGCTCTTCA ACTGGTGGAC CTGGTGGACC
GGCGACACCC TGGGCATGCT CGTCGCCGCC CCGCTCACCC TGGTGTTCAT TGGCCGCCCG
GCGCAGGACT GGCGCCAGCG CAGACTCGGC GTCGCGCTGC CGATGTCGAT CGCGCTCGTG
CTGCTCGCCC TCGCCTACCG GCAGGTGGTG AGCTGGGAGG ATTCGCGCGT GCGGGCGCAG
TTCGAGCGCG ACAGCGTCCA TCTCTCCGCC CTGCTGCAGA AGCGCCTCGA AGAACAGGTC
GACATGGTGC GTTCGATCGA GCGCCTGCTG CTCGCGAGCG ACCAGGTCTC GCGCGCCGAT
TTCCACGAGT TCGTCGCGCC CTGGATGCGA CTGCACCCGG GCACGCGCAG CTTCACCTGG
AACCCTTACG TAAGACACGC TGAGCGCGCG GCATTCGAAG AGGGGATCCG GAGCGACTGC
CGGGTCGATT ACCGCATCCT CGACCGCGAT CCCGCCGGAC AAACTTCGCC TGCTACCGAG
CGTCGCGAGT ATTTCCCGGT CACGCACGTC GAGCCCGAAG AGGGCAACCA CGCCGTGCTC
GGCATGGATC CACTGTCCTT CCCGGTCGCA GGCGAGGCGA TCGAACGCGC GCTGGCCACC
GGCCAGCCAG CGGCCAGCGC GCGCATGCGC CTGGTGCAGG AGCACGGGGA GCAGCATGCC
GTGGTGCTCT ATCAAGCCGT TTTCGCCTCC TCGCCGCCTG CACCGGTCCG CGCCCCGCTC
GGAGTCGTGT CCGCGGCACT GGGCATGGAC GACCTGCTCG CAGCCGTTTC ACGCCAGGCT
GCGGCGCAGG GCATCGCGGT GCGACTCTCC GACCGCGACG CCGGGCCCGA GTCGGCGCTG
CTTGCCGGCG ACGATCGCGG ACAGGAGTCG GTCTGGCCGG AAGAGATCCT GGCGCGCACC
ACGAGCATCG ATTTCGCCGG TCGTCGATGG GAGCTGCACA CCCGCGCCCT GCCCCGCTAC
ATCGAACAGC TGCGCAGCTG GGCAGCGTGG GGCACGATCG CGGTCGGCGT CCTCACCAGC
GCAATGCTCG GCGCGCTCCT GCTCATCACC ACCGGCAACC GTCGCCGCAT CCAGGCGCTG
GTCGAACACC GCACCGCCGA GCTCCAGGCC GCGAGCGTAC GCTTGCATGA AAACCGCGCC
GCACTGATCG ACGCCCAGCG CATCGCCCGC CTCGGCAGCT GGGAGACCCT CTGCGCACGC
GACGGGCTGC ACGCCTCGGA CGAGCTCCAC CTGCTGCTCG ACAGCACGGC AGGCGACCTG
AACTCGCTCG CCGACCTGAT CGACGCGATC GCCCCCGCCA GCCGCGCGGC CCTGACCGAC
GCGCTCGAGC GCGCCGCCAC GGAGCCGGGC CGGATCATGC TCGACTGCAA CACCGACAGC
CTGCCGATGC GCACGCTGCA GTTCCGCATC GAGGGCGAGC ATGTGGGCGG CCGCCTCCGG
CGTATCCGCG GTACCGCGCA GGACGTCACC GCGCTGCGCG AGGCCGAAGC CCGCATCCGC
TACCTGGCCC GCTTCGACCC GCTCACCGGG CTGCTCAACC GCAGCGCCTG GCAGGACCAC
GCCCAGGACG TGCTGCGGCA CGCCGCGCGC CATGACGACC GCTGCGCCGT GCTGTTCCTC
GACCTCGACG ACTTCAAGAC GGTCAATGAC TCGCTCGGCC ACGCCGCCGG CGATCGCCTG
CTCGCCCAGG TGGCCTGCCG CCTCGGCGGC TGCGTACGCG CGGAAGACCT GGTCGCCCGC
ATCGGCGGCG ACGAGTTCGT GATCCTGTTG TCGCGCCTCG CGCACGCCGA AGAGCCGGCG
CGCGTTGCCG AGCGCGTGCT CGATGCGCTC GCCCGCCCGC TGCAGATCGA CAGCCAGCCG
CTGCGCGTCG GCGCGAGCAT CGGAATCGCC CTCTACCCCG CCGACGGTGG CGAGATCGAT
ACGCTGCTCA AGCACGCCGA CACTGCGATG TACGAGGCCA AGGAGTCCGG CCGCAACGCC
TACCGCTTCT TCCTGCCCGA GATGACCCAG CGCGTGACCC GCCGACTGCA GACCGAGGCC
GAGCTGCGCA AGGCGATCGA GAGCGGCGAT CTGCGCCTGC ACTACCAGCC CCAGATCGAC
GCGGCGAGCG GCCGGGTGTA CGGCTGCGAG GCCTTGGTGC GGTGGCAACA TCCCGAGCGG
GGTCTGCTCC CGCCCGACCG CTTCGTCCCT TTCGCCGAAC AGAGCGGCCT GATCGTGCCG
CTCGGGGAAT GGGTGCTGCG CGAAGCCTGC CTGCAGCAGG TGCGCTGGCG CGACGCCGGC
CTGCCGCCGC TCGACGTGGC GGTAAACATC TCGGCGCTGC AGTTCCGCCG GCGCGACTTC
GTCGCCACGG TGGCGCGCGT GCTGGGCGAG ACGGGCGCCG ATCCGGCGCG GATCGAGCTG
GAGATCACCG AGAGCGCGCT GATGGACGCG ACGCCCGAGC TGGTGGCGAG CTTCGACCAG
CTCGTGGCGC TCGGACTGAC GCTGGCCCTG GATGATTTCG GCACCGGCTA CTCCAGCCTG
TCCTACCTCA AGCGCCTGCC GCTGCGCCGC CTGAAGATCG ACCGCTCCTT CGTCGACGGC
CTGCCGGACA ATCCGGAAGA CGCCGCGATC ACCTCGGCCA CCCTGTCGCT CGCCCGCGAC
CTCGGCATGG AGGTGGTCGC CGAGGGCGTG GAAACCGAGG ACCAGCGCGG CTACCTCTGC
AAGCGGGGTT GCCGCGCGAT GCAGGGTTAC CTGTTCTCGC GGCCGCTGGG GGTAGAGGAG
TTCGGCACAT GGTTCGAGGA ACAGGCGGCG GCGATCGCAT GA
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| Protein sequence | MRASPLPAVV LALAYWAVGY PALHLAIPPG YTAPFFPPAG IALAALFVFG LRLWPAVFAG
SALVQLATAW PLLGSAGWNP LGPLAVPIGA TLQAVVGVLL ARRLLAPGDT LDTAGSVMRF
LGICMPLSGL VCSTIGVSAL VWAAVIPASD ALFNWWTWWT GDTLGMLVAA PLTLVFIGRP
AQDWRQRRLG VALPMSIALV LLALAYRQVV SWEDSRVRAQ FERDSVHLSA LLQKRLEEQV
DMVRSIERLL LASDQVSRAD FHEFVAPWMR LHPGTRSFTW NPYVRHAERA AFEEGIRSDC
RVDYRILDRD PAGQTSPATE RREYFPVTHV EPEEGNHAVL GMDPLSFPVA GEAIERALAT
GQPAASARMR LVQEHGEQHA VVLYQAVFAS SPPAPVRAPL GVVSAALGMD DLLAAVSRQA
AAQGIAVRLS DRDAGPESAL LAGDDRGQES VWPEEILART TSIDFAGRRW ELHTRALPRY
IEQLRSWAAW GTIAVGVLTS AMLGALLLIT TGNRRRIQAL VEHRTAELQA ASVRLHENRA
ALIDAQRIAR LGSWETLCAR DGLHASDELH LLLDSTAGDL NSLADLIDAI APASRAALTD
ALERAATEPG RIMLDCNTDS LPMRTLQFRI EGEHVGGRLR RIRGTAQDVT ALREAEARIR
YLARFDPLTG LLNRSAWQDH AQDVLRHAAR HDDRCAVLFL DLDDFKTVND SLGHAAGDRL
LAQVACRLGG CVRAEDLVAR IGGDEFVILL SRLAHAEEPA RVAERVLDAL ARPLQIDSQP
LRVGASIGIA LYPADGGEID TLLKHADTAM YEAKESGRNA YRFFLPEMTQ RVTRRLQTEA
ELRKAIESGD LRLHYQPQID AASGRVYGCE ALVRWQHPER GLLPPDRFVP FAEQSGLIVP
LGEWVLREAC LQQVRWRDAG LPPLDVAVNI SALQFRRRDF VATVARVLGE TGADPARIEL
EITESALMDA TPELVASFDQ LVALGLTLAL DDFGTGYSSL SYLKRLPLRR LKIDRSFVDG
LPDNPEDAAI TSATLSLARD LGMEVVAEGV ETEDQRGYLC KRGCRAMQGY LFSRPLGVEE
FGTWFEEQAA AIA
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