| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2588 |
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| Symbol | |
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| ID | 7873329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2792895 |
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| End bp | 2795027 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643699511 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002889567 |
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| Protein GI | 237653253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0652312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGACCT CGGTGCTGCA CCGCTTCCGT CGTCCGCTGC AGGCCACCGG CCTGCTCGGG
GTACTCTTCG TCCTCAGCGT CTTCATGCCG CCGGTGCGCC TGTTCGCCGA TGCGCGCGAT
TACCTCCCGC TGCATTCAGG GCTGGAGATC TTCTCGCTCG TGGTCGCCGG GATGGTGTTC
GCGCTTGGCT GGAACCTGCG CCGCAGCGCG CGCGGGGCAC GGCTGGTCTG GCTCGGCGCA
GCCTGCCTCG CGGTGGGGCT GCTCGATTTC GCCCACCTGA TGTCCTTTCC GGGCATGCCG
CCCTTCTTCA CGCCCAACAG CGCGGACAAG GCGATCGCCT TCTGGCTGAT GGCGCGTCTG
CTCGGTGTGC TGGGCCTGCT CGCCCATGCC GTGCTGCCGG AGCGCGATGG CGGCGGATCC
GCCGCGGCCT GGGCCGTCCT CGCTGCGATC GGCGTCGCCT TCGGCTGGAG CTGGCTCGTC
CTTGCGCACC CGCAGGTCTT GCCGGCGACC TTCATCGAGG GGCAGGGCGT AACCCCGTTA
AAGAGCGTGC TGGAGGGTGG GCTCGTGCTG CTGCACCTTG CTGCCGCGAT CTTGCTCGCG
CGCCGCGCGC TGGCGGACGG CGAATCCGCC GCTGGCTGGC TGGCCGCCGC CGCGGCGACG
ATGGCGCTGG CCGAGCTGCA TTTCGCGCGT TATGCCGCGG TCGCCGACCT TTACAACGTG
CTCGGGCACG CCTACAAGGT GGCGGCGTTC GCGATGATCT ATCGCGCGGT GTTCGTGTCC
GGCGTGCGTG CGCCACAGCG GGCGCTGGCG GCCGAGCGGG CGCTGCTGCG CGGGCTGATC
GATTCGGTGC CCGACCTGAT CGCCTTCCGC GATCGGGAAG GCCGTTACCT GGGCTGCAAC
AAGGCCTTCG CCGAGGCCTA CGGGATCCGC GAGGCGGCCC TGGTCGGGCG CAGCGACGGC
GAGCTGTTCG CGGGGCGGCT GCCGCTCGCC GGGGCCGGCC AGGACACCGT GAGCTGCGCA
GAGAACCACG AGGAGTGGCT GGAGGCGGCG GACGGAACGC TACGTCTGCT CGACACCTTG
CGCACCCCCT ATTTCGACCT CGACGGCGTG CAGCTCGGCG AGATCCGCGT CAGCCGGGAC
TTCACCGAGC GGCGCCGGGT GCGCGAGCAG ATCGCCGAGC GCGAACGCCG CCTGATGCTC
GCACTCGAAG GTGCCGAGCT CGGTTTGTGG GACTGGGACG TGCCGAGCGG GCGAGCGAAT
TTCAGCCCGA TGTGGTGCAG GATGCTCGGC TATGCAGCGG AGGAGCTGCC GGCGAATGTA
TCGAGCTGGG AGTCCCTGGT GCATCCGGAC GACTGGTACG ACATCCGCGA CTCGCTCGAG
CCGCACCTGC GCGGCACCAA GGATGCCTAT CGCGCGGAAT ACCGGCTCAA GCACAAGAGC
GGGCACTGGG TCTGGGTGCT CGCGGCGGGC CGTGTACTCG ATCGCGGCGA GGGCGGGGAG
GCGCTGCGCA TGGTCGGCAT CCACCAGGAC ATCTCGCAGC GCAAGGCGAT GGAGGAGAGC
CTGCTGCAGC TGGCCACCAG CGATCCGCTC ACCGGGCTAT GGAATCGCCG CCACTTCGTC
GAGGTCGTGC GCGGCGAACT CGGACGCGTG CGCCGCAACC AGGCGCCGGC AGCGCTGCTG
CTGATGGACC TCGACTTCTT CAAGCGCATC AACGACACCC ACGGCCATGC CGCGGGTGAC
GAGGTGCTGC GCCATTTCAC CGCGACGGTG AGCGCGCAGT TGCGCGAGGC CGACGTGTTC
GCACGCCTGG GCGGGGAGGA GTTCGCGGTC CTGCTTCCCA GCATCGACGC GCTCGGCGCG
GTGCGGGCGG CGGACCGGCT GCGCAGGGTG GTGGCGGATT CGCCGGCCAG CGTCGACTCG
GGGGCGCTGC ACTATTCGGT CAGCATCGGT GCGACCATGC TGGACGCGGC CGACGAAGGC
TACGAGGCCG CCTATGCGCG CGCCGACGAG GCCTTGTACG CGGCCAAGCA CGCCGGGCGT
AACCGCGTCG TGCTGGCGCC GGCGAGTGCC GGTGCGCCCT GCGGCGAGCC CGTCAGCGAG
GGGGCCGCCG CAGGGGCTGC GGATCAGCGG TAG
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| Protein sequence | MATSVLHRFR RPLQATGLLG VLFVLSVFMP PVRLFADARD YLPLHSGLEI FSLVVAGMVF
ALGWNLRRSA RGARLVWLGA ACLAVGLLDF AHLMSFPGMP PFFTPNSADK AIAFWLMARL
LGVLGLLAHA VLPERDGGGS AAAWAVLAAI GVAFGWSWLV LAHPQVLPAT FIEGQGVTPL
KSVLEGGLVL LHLAAAILLA RRALADGESA AGWLAAAAAT MALAELHFAR YAAVADLYNV
LGHAYKVAAF AMIYRAVFVS GVRAPQRALA AERALLRGLI DSVPDLIAFR DREGRYLGCN
KAFAEAYGIR EAALVGRSDG ELFAGRLPLA GAGQDTVSCA ENHEEWLEAA DGTLRLLDTL
RTPYFDLDGV QLGEIRVSRD FTERRRVREQ IAERERRLML ALEGAELGLW DWDVPSGRAN
FSPMWCRMLG YAAEELPANV SSWESLVHPD DWYDIRDSLE PHLRGTKDAY RAEYRLKHKS
GHWVWVLAAG RVLDRGEGGE ALRMVGIHQD ISQRKAMEES LLQLATSDPL TGLWNRRHFV
EVVRGELGRV RRNQAPAALL LMDLDFFKRI NDTHGHAAGD EVLRHFTATV SAQLREADVF
ARLGGEEFAV LLPSIDALGA VRAADRLRRV VADSPASVDS GALHYSVSIG ATMLDAADEG
YEAAYARADE ALYAAKHAGR NRVVLAPASA GAPCGEPVSE GAAAGAADQR
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