| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2573 |
|---|
| Symbol | |
|---|
| ID | 7874012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2778737 |
|---|
| End bp | 2780200 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643699496 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_002889552 |
|---|
| Protein GI | 237653238 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.866855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTATC TCTCCACCCG CGGCCACGCC GGCCAGCCCG CCAACCCGGA GTTCTGCGAC
ATCCTGCTCG GCGGCCTCGC CCCCGACGGC GGCCTCTACC TGCCCGAGAC CTATCCGCAG
GTGACGCGCG CCGAGCTCGA CGCCTGGCGC GGCCTGTCCT ACGCAGAGCT GGCGTTCGCG
ATCCTGTCGA AGTTCATCAC CGACATCCCC GCCGTCGACC TGAAGGCGAT CTGCGCCAAG
ACCTACACCG CCGAGGTCTA TCGCCACGTG CGCGCGGGCG GCGACGCGCG CGACATCACT
CCGGTGCACT GGCTGGAGAA GGATGCCGAC GGCCGCGGCC GCCTCGGCCT GCTCGAGCTG
TCCAATGGCC CGACGCTGGC CTTCAAGGAC ATGGCCATGC AGCTGCTCGG CAACCTCTTC
GAATACGTGC TCGCGAAGCG TGGCGAGACC ATCAACATCC TCGGTGCCAC CTCGGGCGAT
ACCGGCTCGG CGGCCGAGTA CGCGATGCGC GGCAAGCACG GCGTGCGTGT GTTCATGCTG
TCGCCGCACG GCAAGATGAG CGCCTTCCAG CGCGCGCAGA TGTATTCGCT GCAGGACGAC
AACATCTTCA ACATCGCCGT CACCGGCATG TTCGACGATG CCCAGGACAT CGTGAAGGCG
GTCTCCAACG ATCACGCCTT CAAGGCCAGG CACAAGATCG GTGCAGTGAA TTCGATCAAC
TGGGCGCGGG TCGCGGCGCA GATCGTGTAT TACTTCAAGG GCTACTTCGC GGCCACGACG
AGCAACGACG AGCAGGTCGC CTTCTGCGTG CCCTCGGGCA ACTTCGGCAA CATCTGCGCC
GGCCACATCG CCCGCCAGAT GGGCCTGCCG GTGGCGAAGC TGATCCTCGC CACCAACGAG
AACGACGTGC TCGACGAGTT CTTCCGCAGC GGCGTGTATC GCCCGCGCAA GGCGGCCGAG
ACGCACGTGA CCTCCAGCCC GTCGATGGAC ATCTCCAAGG CCTCGAACTT CGAGCGCTTC
GTCTTCGACC TGGTCGGCCG CGACCCGAGC AAGGTGGCCG CGCTGTGGGC CGAGGTCGAC
GCCGGGCGCG CCTTCGACCT GTCCGGCACG GACGAATTCG CCCGCATCGG CGCGTTCGGC
TTCGTGTCTG GCGCGAGCAG CCATGCCGAT CGCCTGGCGA CCATCCGCAA GGTGTACGAG
CGCTACGGCG TGATGATCGA CACCCACACC GCCGACGGCG TCAAGGTGGC CTGGGAGCGC
GCCGCCGACG TACCTGCGGG CGTGCCGGTG CTGGTGCTGG AGACCGCGCT GCCGGTGAAA
TTCGCCGAGA CCATCGTCGA GGCCCTTGGG CGCGAGCCGG AGCGTCCCGC AGACCTCGAA
GGCATCGAGA AGCTGCCGCA GCGCGTCGAG GTGATGGCGC CCGACGCCGA CGCGATCAAG
CGCTTCATCG CCCAGCGCAC CTGA
|
|---|
| Protein sequence | MKYLSTRGHA GQPANPEFCD ILLGGLAPDG GLYLPETYPQ VTRAELDAWR GLSYAELAFA
ILSKFITDIP AVDLKAICAK TYTAEVYRHV RAGGDARDIT PVHWLEKDAD GRGRLGLLEL
SNGPTLAFKD MAMQLLGNLF EYVLAKRGET INILGATSGD TGSAAEYAMR GKHGVRVFML
SPHGKMSAFQ RAQMYSLQDD NIFNIAVTGM FDDAQDIVKA VSNDHAFKAR HKIGAVNSIN
WARVAAQIVY YFKGYFAATT SNDEQVAFCV PSGNFGNICA GHIARQMGLP VAKLILATNE
NDVLDEFFRS GVYRPRKAAE THVTSSPSMD ISKASNFERF VFDLVGRDPS KVAALWAEVD
AGRAFDLSGT DEFARIGAFG FVSGASSHAD RLATIRKVYE RYGVMIDTHT ADGVKVAWER
AADVPAGVPV LVLETALPVK FAETIVEALG REPERPADLE GIEKLPQRVE VMAPDADAIK
RFIAQRT
|
|---|
| |