| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2561 |
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| Symbol | |
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| ID | 7874000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2761899 |
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| End bp | 2762690 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643699483 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002889540 |
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| Protein GI | 237653226 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.52541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ACGCCCTTCT GTGCGCGGTG CTCGCCCTTC ACGCCGGCGC CGGTTTTGCC
AAGGACTGGA ACGAGATCCG CCTGGCGTCC GAGGGCGCCT ACCCTCCCTT CAACCTCATC
GCCGCCGACG GAAGCCTGCA AGGTTTCGAT ATCGACATCG GCAATGCCTT GTGCGAGGAG
ATGAAGGCCA AGTGCACCTG GGTGAAGCAG GAGTGGGACG GCATGATCCC GGCGCTGGTC
TCGCGCAAGT TCGATGCGAT CATTGCCTCG ATGTCGATCA CCGACGAGCG CAAGGCCAAG
GTGGATTTCA CCGAGAAGTA CTATGCGTCG CCGCTGGCCC TGATCGCGAA GAAGGGCTCG
ACCCTGCGGC CCGATCTCCC CTCCCTGGCC GGGAAGAAGG TCGGCGTGCA GCGCGGCACG
GTATCGGACA ACTTCGCCAC CAAGTATTGG GACGGCAAAG GCATGCAGAT CATCCGTTAC
GCCAAGCAGG ACGAGGCCTA CCTCGACCTG CGCGCCGGAC GTCTCGATGC GGCCTTCTCC
GATTACCTCG AGGCCTACGG CGGTTTCCTG ACCAAACCCG AGGGCGCGGG CTACGACGTC
GCCGGCGAAC GCCTCTTCGG CAAGGACGCC GACGAGAAGG CGGTGATCGG CGAGGGCATC
GGCATCGCGG TGCGCAAGCG CGACAAGGAG CTCACCGAGA AGCTGAACCA GGCACTCGGC
GCGATCCGCG CCAACGGCAA GTACGATGCG ATCCAGAAGA AGTACTTCCC GATGGACATC
TACGGCAACT GA
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| Protein sequence | MKKYALLCAV LALHAGAGFA KDWNEIRLAS EGAYPPFNLI AADGSLQGFD IDIGNALCEE
MKAKCTWVKQ EWDGMIPALV SRKFDAIIAS MSITDERKAK VDFTEKYYAS PLALIAKKGS
TLRPDLPSLA GKKVGVQRGT VSDNFATKYW DGKGMQIIRY AKQDEAYLDL RAGRLDAAFS
DYLEAYGGFL TKPEGAGYDV AGERLFGKDA DEKAVIGEGI GIAVRKRDKE LTEKLNQALG
AIRANGKYDA IQKKYFPMDI YGN
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