Gene Tmz1t_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2558 
Symbol 
ID7873997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2759462 
End bp2760244 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID643699480 
ProductABC transporter related 
Protein accessionYP_002889537 
Protein GI237653223 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.411241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACA AGGCCAGCGT CGAACAGGTC CGCGTCGAAG ACTTGCACAA ATCCTACGGC 
GACCATGAGG TGCTCAAGGG CGTCTCGCTG ACCGCGAACT CGGGCGACGT GATCAGCATC
ATCGGGTCCT CCGGCTCCGG CAAGAGCACG TGGCTGCGCT GCATCAACTT CCTCGAGTGC
CCGACCGCCG GGCGCATCCT GGTGGGCGGC AAGGAGGTCG AGCTGGTGCG TGACCGCAAG
GGCGAGCTGG TGGTCAAGGA CGCGCACCAG TTGCAGCAGA TCCGCACGCG CTTGTCGATG
GTGTTCCAGC ACTTCAATCT GTGGAGCCAC ATGACGGTGC TCGAGAACGT CGTCGAGGCG
CCGGTGCATG TGCTCGGACT GTCGAAGGCC GCGGCCCGCG AGCGCGCCGA GCGCTACCTG
GAGCGGGTGG GGGTGTGGAA GTTCCGCGAT GCCTATCCTG CGCACATGTC GGGCGGCCAG
CAGCAGCGCG TGGCGATCGC GCGCGCGCTG GCGATGGAGC CTGCGGTGCT GCTGTTCGAC
GAGCCGACCT CGGCGCTCGA CCCCGAACTC GTCGGCGAGG TGCTCAAGGT GATGCGCTCG
CTCGCCGAGG AAGGCCGCAC GATGATGGTG GTGACGCACG AGATGGGCTT CGCGCGCGAG
GTGTCCAACC ACGTGATCTT CGTGCACCAG GGGCGCGTCG AGGAGGAGGG CGACCCCAAG
GAGGTGCTGG TGCGTCCGCG CAGCGAACGC CTGCAGCAGT TCCTCTCGGG CAATCTGAAG
TGA
 
Protein sequence
MNHKASVEQV RVEDLHKSYG DHEVLKGVSL TANSGDVISI IGSSGSGKST WLRCINFLEC 
PTAGRILVGG KEVELVRDRK GELVVKDAHQ LQQIRTRLSM VFQHFNLWSH MTVLENVVEA
PVHVLGLSKA AARERAERYL ERVGVWKFRD AYPAHMSGGQ QQRVAIARAL AMEPAVLLFD
EPTSALDPEL VGEVLKVMRS LAEEGRTMMV VTHEMGFARE VSNHVIFVHQ GRVEEEGDPK
EVLVRPRSER LQQFLSGNLK