Gene Tmz1t_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2550 
Symbol 
ID7873989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2751408 
End bp2751797 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content59% 
IMG OID643699472 
Productsuccinate dehydrogenase, cytochrome b556 subunit 
Protein accessionYP_002889529 
Protein GI237653215 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.411749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG TAACAGCGCG CAAACCAAGG CCGAAGTACC TGGCCCTCAA CGAGATCCGG 
CTGCCGTTGC CGGGCATCGT CTCGATCCTT CACCGCATCA GCGGCGTCGG CATCTTCCTG
ATGTTGCCTT TCCTGTTGTA CCTGCTCGAT CGCAGCCTCG GCTCTCCGGA GACCTTCGAG
ACCTTCGCCG CGGTGGTCGA CAACTGGTTC ATCAAGCTCG TCCTGTTCGG TCTGCTGTGG
GCCTACCTGC ATCACTTCTG TGCCGGCATC CGCTTCCTGC TGCTCGACCT GCACAAGGGT
CTGGAGCTCG AGGAAGCACG CAAGTCCTCC AAAATCGTTC TGATCGTGAG CCTTACGCTC
ACCTTGATCA TCGGGGTGGT CCTATGGTGA
 
Protein sequence
MSEVTARKPR PKYLALNEIR LPLPGIVSIL HRISGVGIFL MLPFLLYLLD RSLGSPETFE 
TFAAVVDNWF IKLVLFGLLW AYLHHFCAGI RFLLLDLHKG LELEEARKSS KIVLIVSLTL
TLIIGVVLW