Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2548 |
Symbol | |
ID | 7873987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 2749268 |
End bp | 2751061 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643699470 |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_002889527 |
Protein GI | 237653213 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.393014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGTCG CGAAGCGTAC CTTTGATGCG GTCATCGTGG GCGCCGGCGG TGCCGGCCTG CGCGCGGCCC TGCAACTTTC CGAAGCCGGC CTCAAGACCG CCGTGCTGAC CAAGGTGTTC CCGACCCGCT CGCACACCGT GGCGGCGCAG GGCGGCGTCG CCGCCTCGCT GGGCAACTCG ACCGAGGACA ACTGGCACTG GCACATGTAC GACACCGTCA AGGGGTCGGA CTGGCTGGGC GACCAGGATG CCATCGAGTT CATGTGCAAG AAGGCCAACG AGGTCGTCAT CGAGCTCGAG CACTACGGCA TGCCCTTCGA CCGCACCGAC AACGGCAAGA TCTACCAGCG TCCGTTCGGC GGCCACTCGA TGAACTACGG CCAGGCGCCG GTGATGCGCT CCTGCGCGGC GGCCGACCGT ACCGGCCACG CCATGCTGCA CGCGCTCTAC CAGCGCAACG TGCGCGCCAA CACCCAGTTC TTCGTCGAAT GGATGGCGCT CGACCTGATC CGCGACGCCG ATGGCGACGT GCTCGGCGTC ACCGCGATGG AAATGGAGAC CGGCGAGGTC TCGATCTTCC ACGCCAAGGC CACCATCTTC GCCACCGGCG GTGCCGGCCG CATCTACTAT TCCTCGACCA ACGCCTTCAT CAACACCGGC GACGGCGTGG GCATGGCGGC GCGTGCCGGC ATCCCGCTCG AGGACATGGA GTTCTGGCAG TTCCACCCCA CCGGCGTTGC CGGCGCGGGC GTGCTCATCA CCGAAGGCGT GCGCGGCGAG GGCGGCATCC TGCGCAACGC CCAGGGCGAG CGCTTCATGG AGCGCTACGC GCCCAACCTC AAGGATCTCG CCTCGCGCGA CGTGGTTTCG CGCGCGATGA CCACCGAGAT CAACGAAGGT CGTGGCTGCG GTCCCGACAA GGATCACGTG CTGCTCGACA TCACGCACCT TGCGCCCGAC ACTATCATGA AGCGCCTGCC CGGCATCCGC GAGATCGCGA TCCAGTTCGC CGGCGTCGAC CCGATCAAGG CGCCGATCCC GGTCGTGCCG ACCTGCCACT ACCAGATGGG CGGCATCCCG ACCAACTACA AGGGCCAGGT CGTGGTGCCG AAGGACGGCA ACCCGAACAG CCCGGTGGCC GGCTTCTACG CCGCGGGCGA GTGCGCCTGC GCCTCGGTGC ACGGCGCCAA CCGCCTCGGC ACCAACTCGC TGCTCGACCT GCTGGTGTTC GGCAAGTCGG CGGGCGAGAC CGTGGTCGAG GACTTCCAGT CCGGCCAGCT CAAGCTCAAG CCGCTGCCGG CCGACGCTGC CGACGTCTCG CTCGCCCGCC TGGCCCGCCT CGACGGCCAG ACCAACGGCG AGAGCGTGTT CGACGTCGGC CTCGAGATGC GTCGCACGAT GCAGAAGCAC GCCGGCGTGT TCCGCTTCGA CAACCTGCTC AAGGAAGGCG TGCAGAAGAT CGGCGAGGTC GCCGAGCGTG CCAAGCGCAC CCAGATCGCG GACAAGTCAA AGGTCTGGAA CGTCGCCCGC ATGGAAGCGC TCGAGCTCGA TAACCTGATC GAGGTCGCGC GCGCCACCAT GGTCTCGGCC GAGGCCCGCA AGGAGTCGCG TGGCGCCCAC GTCCGCGACG ACGCGCCCGA CACCGCCGAG AACCCCAACG GCCGCGACGA CGCCAACTGG CTCAAGCACA CCCTCTGGTA TTCGGAAGGC AATCGCCTCG ATTACAAGCC GGTGAACCTG AAGCCGCTGT CCGACGACGT CGAGCCGATC GCGCTCGCCA AGCGTACCTA TTGA
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Protein sequence | MNVAKRTFDA VIVGAGGAGL RAALQLSEAG LKTAVLTKVF PTRSHTVAAQ GGVAASLGNS TEDNWHWHMY DTVKGSDWLG DQDAIEFMCK KANEVVIELE HYGMPFDRTD NGKIYQRPFG GHSMNYGQAP VMRSCAAADR TGHAMLHALY QRNVRANTQF FVEWMALDLI RDADGDVLGV TAMEMETGEV SIFHAKATIF ATGGAGRIYY SSTNAFINTG DGVGMAARAG IPLEDMEFWQ FHPTGVAGAG VLITEGVRGE GGILRNAQGE RFMERYAPNL KDLASRDVVS RAMTTEINEG RGCGPDKDHV LLDITHLAPD TIMKRLPGIR EIAIQFAGVD PIKAPIPVVP TCHYQMGGIP TNYKGQVVVP KDGNPNSPVA GFYAAGECAC ASVHGANRLG TNSLLDLLVF GKSAGETVVE DFQSGQLKLK PLPADAADVS LARLARLDGQ TNGESVFDVG LEMRRTMQKH AGVFRFDNLL KEGVQKIGEV AERAKRTQIA DKSKVWNVAR MEALELDNLI EVARATMVSA EARKESRGAH VRDDAPDTAE NPNGRDDANW LKHTLWYSEG NRLDYKPVNL KPLSDDVEPI ALAKRTY
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