Gene Tmz1t_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2548 
Symbol 
ID7873987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2749268 
End bp2751061 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content68% 
IMG OID643699470 
Productsuccinate dehydrogenase or fumarate reductase, flavoprotein subunit 
Protein accessionYP_002889527 
Protein GI237653213 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.393014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGTCG CGAAGCGTAC CTTTGATGCG GTCATCGTGG GCGCCGGCGG TGCCGGCCTG 
CGCGCGGCCC TGCAACTTTC CGAAGCCGGC CTCAAGACCG CCGTGCTGAC CAAGGTGTTC
CCGACCCGCT CGCACACCGT GGCGGCGCAG GGCGGCGTCG CCGCCTCGCT GGGCAACTCG
ACCGAGGACA ACTGGCACTG GCACATGTAC GACACCGTCA AGGGGTCGGA CTGGCTGGGC
GACCAGGATG CCATCGAGTT CATGTGCAAG AAGGCCAACG AGGTCGTCAT CGAGCTCGAG
CACTACGGCA TGCCCTTCGA CCGCACCGAC AACGGCAAGA TCTACCAGCG TCCGTTCGGC
GGCCACTCGA TGAACTACGG CCAGGCGCCG GTGATGCGCT CCTGCGCGGC GGCCGACCGT
ACCGGCCACG CCATGCTGCA CGCGCTCTAC CAGCGCAACG TGCGCGCCAA CACCCAGTTC
TTCGTCGAAT GGATGGCGCT CGACCTGATC CGCGACGCCG ATGGCGACGT GCTCGGCGTC
ACCGCGATGG AAATGGAGAC CGGCGAGGTC TCGATCTTCC ACGCCAAGGC CACCATCTTC
GCCACCGGCG GTGCCGGCCG CATCTACTAT TCCTCGACCA ACGCCTTCAT CAACACCGGC
GACGGCGTGG GCATGGCGGC GCGTGCCGGC ATCCCGCTCG AGGACATGGA GTTCTGGCAG
TTCCACCCCA CCGGCGTTGC CGGCGCGGGC GTGCTCATCA CCGAAGGCGT GCGCGGCGAG
GGCGGCATCC TGCGCAACGC CCAGGGCGAG CGCTTCATGG AGCGCTACGC GCCCAACCTC
AAGGATCTCG CCTCGCGCGA CGTGGTTTCG CGCGCGATGA CCACCGAGAT CAACGAAGGT
CGTGGCTGCG GTCCCGACAA GGATCACGTG CTGCTCGACA TCACGCACCT TGCGCCCGAC
ACTATCATGA AGCGCCTGCC CGGCATCCGC GAGATCGCGA TCCAGTTCGC CGGCGTCGAC
CCGATCAAGG CGCCGATCCC GGTCGTGCCG ACCTGCCACT ACCAGATGGG CGGCATCCCG
ACCAACTACA AGGGCCAGGT CGTGGTGCCG AAGGACGGCA ACCCGAACAG CCCGGTGGCC
GGCTTCTACG CCGCGGGCGA GTGCGCCTGC GCCTCGGTGC ACGGCGCCAA CCGCCTCGGC
ACCAACTCGC TGCTCGACCT GCTGGTGTTC GGCAAGTCGG CGGGCGAGAC CGTGGTCGAG
GACTTCCAGT CCGGCCAGCT CAAGCTCAAG CCGCTGCCGG CCGACGCTGC CGACGTCTCG
CTCGCCCGCC TGGCCCGCCT CGACGGCCAG ACCAACGGCG AGAGCGTGTT CGACGTCGGC
CTCGAGATGC GTCGCACGAT GCAGAAGCAC GCCGGCGTGT TCCGCTTCGA CAACCTGCTC
AAGGAAGGCG TGCAGAAGAT CGGCGAGGTC GCCGAGCGTG CCAAGCGCAC CCAGATCGCG
GACAAGTCAA AGGTCTGGAA CGTCGCCCGC ATGGAAGCGC TCGAGCTCGA TAACCTGATC
GAGGTCGCGC GCGCCACCAT GGTCTCGGCC GAGGCCCGCA AGGAGTCGCG TGGCGCCCAC
GTCCGCGACG ACGCGCCCGA CACCGCCGAG AACCCCAACG GCCGCGACGA CGCCAACTGG
CTCAAGCACA CCCTCTGGTA TTCGGAAGGC AATCGCCTCG ATTACAAGCC GGTGAACCTG
AAGCCGCTGT CCGACGACGT CGAGCCGATC GCGCTCGCCA AGCGTACCTA TTGA
 
Protein sequence
MNVAKRTFDA VIVGAGGAGL RAALQLSEAG LKTAVLTKVF PTRSHTVAAQ GGVAASLGNS 
TEDNWHWHMY DTVKGSDWLG DQDAIEFMCK KANEVVIELE HYGMPFDRTD NGKIYQRPFG
GHSMNYGQAP VMRSCAAADR TGHAMLHALY QRNVRANTQF FVEWMALDLI RDADGDVLGV
TAMEMETGEV SIFHAKATIF ATGGAGRIYY SSTNAFINTG DGVGMAARAG IPLEDMEFWQ
FHPTGVAGAG VLITEGVRGE GGILRNAQGE RFMERYAPNL KDLASRDVVS RAMTTEINEG
RGCGPDKDHV LLDITHLAPD TIMKRLPGIR EIAIQFAGVD PIKAPIPVVP TCHYQMGGIP
TNYKGQVVVP KDGNPNSPVA GFYAAGECAC ASVHGANRLG TNSLLDLLVF GKSAGETVVE
DFQSGQLKLK PLPADAADVS LARLARLDGQ TNGESVFDVG LEMRRTMQKH AGVFRFDNLL
KEGVQKIGEV AERAKRTQIA DKSKVWNVAR MEALELDNLI EVARATMVSA EARKESRGAH
VRDDAPDTAE NPNGRDDANW LKHTLWYSEG NRLDYKPVNL KPLSDDVEPI ALAKRTY