| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2544 |
|---|
| Symbol | sucA |
|---|
| ID | 7873983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2743921 |
|---|
| End bp | 2746770 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 949 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643699466 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_002889523 |
|---|
| Protein GI | 237653209 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.483047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGC AACTCGAACA GACTTCGCAC TTGTTCGGCT CGAACGCGCC GTTCATCGAA
GAGCAGTACG AAAACTACCT CGCCGATCCG GCCTCGGTGT CCGCCGAGTG GCGCGAATAT
TTCGACAAGC TGCAGGTTCA GGTCGGCGCT GCCGCGCGCG ACGTGCCGCA TGGTCCGGTC
ATTGCCGCCT TCGAGCAGAT GGCCAAGCGC GGCCCGGTGC GCACCATCGT CACCGCCGGC
GAGGACAAGC AGCAGGTCTC CGTGCTGCAA CTGATCAACG CCTACCGCTT CCTCGGCAAC
CGCTGGGCCA ACCTCGATCC GCTCAAGCGC ACCGAGCGCC CGCAGATCGC CGAGCTCGAG
CCGTCCTATT ACGGCTTCAC CGAAGCCGAT CTCTCCAAGA GCTTCAACGT CGGCTCCTTC
CACGGCTTCA GCACCGAGCG CGCCACCCTG CGCGAGATCC TCGAGGCGCT GCGCCAGACC
TACTGCGGCT CGATCGGCGC CGAGTACATG TACATGACCG ACATCGGTCA GAAGCGCTGG
ATCCAAAGCC GCCTCGAGAG CCTGCGCGGT ACGCCGAAGT TCTCGGCGGA GATGAAGAAG
CGCATCCTCG AGCGCACCAC CGCGGCCGAG ACCCTGGAGC GCTATCTGCA CACCCGCTAC
GTCGGCCAGA AGCGCTTCTC GCTCGAAGGC GGCGAGTCGG CCATCGTCGC GATGGACGAA
CTGATCCGCG TCGCCGGCAG CCTGGGTGTG CAGGAAAGCG TGATCGGCAT GGCCCACCGC
GGCCGCCTCA ACGTGCTCGT CAACACCCTG GGCAAGTCGC CCTCGATGCT GTTCTCGGAG
TTCGAGGGCA AGGCCGCGGC CGACCTCACC GCCGGCGACG TGAAGTACCA CATGGGCTTC
TCGAGCGACG TGATGACCCC GGGCGGCCCG ATGCACCTGA CGCTCGCGTT CAACCCCTCG
CACCTCGAGA TCATCAACCC GGTGGTCGAG GGCTCGGTGT ATGCCCGCCA GGTCCGTCGC
GGCGACGCCG ACAAGAAGCA GGTGCTGCCG GTGCTGATCC ACGGCGACGC CGCCGTGGCC
GGCCAGGGCG TTAACCAGGA AATGCTCAAC TTCTCGCAGA CTCGCGGCTA CGGCACGGGC
GGCACGGTGC ACCTGGTCGT CAACAACCAG ATCGGCTTCA CCACCTCCGA CCCGCGCGAC
TACCGTTCCT CGCTTTACTG CACCGACATC TTCAAGATGG TCGAGGCGCC GATCTTCCAC
GTCAATGGCG ACGATCCCGA GGCCGTGGCC CTGGTCACCG CGCTGGCGGT CGAATTCCGC
CAGGAGTTCA AGAAGGACGT CGTGGTCGAC ATCATCTGCT TCCGCAAGCT CGGCCACAAC
GAGCAGGACG AGCCGATGGT GACGCAGCCG CTGATGTACC GCACCATCCA GAAGCACCCC
GGCACCCGCA AGCTCTACGC CGAGCGCCTG GTCGCCGAGG GCACCCTGAA GGCCGAGGAG
CCCGACCAGA TGATCGCCGA GTACCGCGAG CATCTCGACA AGGGCCAGCT GCTCTACAAC
CCGGTGCTCT CCGGCCACAA CCGCCAGTTC GCCGCGGACT GGACGCCCTA CATCAAGCAG
CCCTACACCG ACGAGTGCGA CACCACGGTG CCGGTGCAGG AGATCAAGCG CCTGTCCGAG
CGCCTGAGTA CCATCCCGGC GAACTTCACG CTGCACTCGC GCGTCAAGAA GATCATCGAC
GACCGCGCCG CGATGGGGCG TGGCGAAGCG CCCTTCGACT GGGGCATGGG CGAGAACCTG
GCCTACGCCA GCCTGCTGGC GCAGGGTTAC GGCGTGCGCC TCTCCGGCGA GGACGTCGGC
CGCGGCACCT TCTTCCATCG CCACGCCGTG CTGCACGACC AGAAGCGCGA GCGCTGGGAC
GAAGGCATCT ACAAGCCGCT CGACCACATC CAGGACGGCC AGGCCCGCTT CCAGAGCTAC
GACTCGGTGT TGTCGGAGGA GGGCGTGCTC GCCTTCGAAT ACGGCTACGC CACCACCGAG
CCCAACGAGC TCGTCATCTG GGAAGCCCAG TTCGGCGACT TCGTGAACGG CGCCCAGGTC
GTGCTCGACC AGTTCATCAG CTCGGGCGAG GCCAAGTGGG GTCGCCTGTG CGGTCTCACG
CTGATGCTGC CGCACGGCTA CGAGGGCCAG GGCCCCGAGC ACTCGTCCGC CCGTCTCGAG
CGCTACATGA ACAACGCTGC CGAGCACAAC TGGCAGATCT GCGTGCCGAC CACCCCGGCG
CAGATCTTCC ACCTGCTGCG CCGCCAGGCG ATCCGCAAGG TGCGCAAGCC GCTGATCATC
ATCACGCCGA AGTCGCTGCT GCGTCACAAG GAGGCGATTT CCTCGATCGA GGAACTGGCC
AACGGCAGCT TCCAGACGGT GATCCCCGAG GTCGAGAAGC TCGACGCCAA GAAGGTCAAG
CGCGTGGTTC TGTGCCAGGG CAAGATCTAT TACGAGCTCC TCGCCCATCG CCGCGAGAAC
AAGATCACCG ACACCGCGCT GGTCCGCATC GAGCAGCTCT ATCCGTTCCC GACCGAGGCC
TTCGCCAAGG CGATCGAGCA GTTCCCGAAC GCCAAGGAGA TCGTCTGGGC CCAGGAAGAG
CCGCGCAACC AGGGCGCGTG GTACTGGCTC GCCTCGCGCC AGCACCTGGT CAACGTGCTC
GGCACCAAGC GCCGTCTGCT GCTGGTGAGC CGCCCGGCCG CCGCCTCGCC CGCGGTCGGC
TACTACGCCA AGCACAACGC GCAACAAAAG GCGGTCCTCG AAAACGCCTT CGGTCCGATC
CAGGACACCA CGCCGCAGTC CCCGCACTGA
|
|---|
| Protein sequence | MMKQLEQTSH LFGSNAPFIE EQYENYLADP ASVSAEWREY FDKLQVQVGA AARDVPHGPV
IAAFEQMAKR GPVRTIVTAG EDKQQVSVLQ LINAYRFLGN RWANLDPLKR TERPQIAELE
PSYYGFTEAD LSKSFNVGSF HGFSTERATL REILEALRQT YCGSIGAEYM YMTDIGQKRW
IQSRLESLRG TPKFSAEMKK RILERTTAAE TLERYLHTRY VGQKRFSLEG GESAIVAMDE
LIRVAGSLGV QESVIGMAHR GRLNVLVNTL GKSPSMLFSE FEGKAAADLT AGDVKYHMGF
SSDVMTPGGP MHLTLAFNPS HLEIINPVVE GSVYARQVRR GDADKKQVLP VLIHGDAAVA
GQGVNQEMLN FSQTRGYGTG GTVHLVVNNQ IGFTTSDPRD YRSSLYCTDI FKMVEAPIFH
VNGDDPEAVA LVTALAVEFR QEFKKDVVVD IICFRKLGHN EQDEPMVTQP LMYRTIQKHP
GTRKLYAERL VAEGTLKAEE PDQMIAEYRE HLDKGQLLYN PVLSGHNRQF AADWTPYIKQ
PYTDECDTTV PVQEIKRLSE RLSTIPANFT LHSRVKKIID DRAAMGRGEA PFDWGMGENL
AYASLLAQGY GVRLSGEDVG RGTFFHRHAV LHDQKRERWD EGIYKPLDHI QDGQARFQSY
DSVLSEEGVL AFEYGYATTE PNELVIWEAQ FGDFVNGAQV VLDQFISSGE AKWGRLCGLT
LMLPHGYEGQ GPEHSSARLE RYMNNAAEHN WQICVPTTPA QIFHLLRRQA IRKVRKPLII
ITPKSLLRHK EAISSIEELA NGSFQTVIPE VEKLDAKKVK RVVLCQGKIY YELLAHRREN
KITDTALVRI EQLYPFPTEA FAKAIEQFPN AKEIVWAQEE PRNQGAWYWL ASRQHLVNVL
GTKRRLLLVS RPAAASPAVG YYAKHNAQQK AVLENAFGPI QDTTPQSPH
|
|---|
| |