| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2509 |
|---|
| Symbol | |
|---|
| ID | 7873948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2710490 |
|---|
| End bp | 2710954 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643699431 |
|---|
| Product | CMP/dCMP deaminase zinc-binding |
|---|
| Protein accession | YP_002889488 |
|---|
| Protein GI | 237653174 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0557203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG AAGACTACAT GCGCGCTGCG CTCGAGCAGG CGCGCGCGGC CGGGGCCGCG
GACGAGGTGC CGGTGGGCGC GGTGGTGGTG TGCGGGGGCG AGATCGTCGG CCGCGGCTTC
AACCAACCGA TCGGGCGCCA CGACCCTACC GCGCACGCCG AGATCATGGC GCTGCGCGAC
GCCGCGGCGC ACCTCGGCAA CTACCGCCTG CCCGGCTGCG AGCTCTACGT CACCCTGGAG
CCCTGCGCGA TGTGCTCGGG TGCGATCATG CACGCCCGCA TCGCGCGCGT GGTGTTCGGT
GCGCGCGACC CCAAGACCGG TGTCGCCGGC AGCGTGCTCG ATCTCTTCGC CGAGCCGCGC
CTCAACCATC ACGCCACCAT CGAGGGCGGA CTGCTCGCCG ACGAGTGCGG GCGCATGTTG
TCGAGCTTCT TCGCCGCCCG CCGCGGGCGC ACGCTGGTGG CCTGA
|
|---|
| Protein sequence | MNDEDYMRAA LEQARAAGAA DEVPVGAVVV CGGEIVGRGF NQPIGRHDPT AHAEIMALRD
AAAHLGNYRL PGCELYVTLE PCAMCSGAIM HARIARVVFG ARDPKTGVAG SVLDLFAEPR
LNHHATIEGG LLADECGRML SSFFAARRGR TLVA
|
|---|
| |