| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2505 |
|---|
| Symbol | |
|---|
| ID | 7873944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2707662 |
|---|
| End bp | 2708699 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643699427 |
|---|
| Product | folate-binding protein YgfZ |
|---|
| Protein accession | YP_002889484 |
|---|
| Protein GI | 237653170 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.438476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCT GGACCGAACA CCTCGCCCGC ATGGGCGCCA CGCTCGACGA AACCGCCCGC
TCCATCGCCT TCGCCTCGCC CGCCGACGAA GCGCGCGCGA CCGAGACCGC CACCATCGCG
GTGCCGCTGC TGCACCTGGG CACGATCCGC TCGCAGGGCC CGGACTCCGC CGCCTTCCTG
CACAACCTGG TGTCGAACGA CGTCAAGCAC ATGGAAGCCG ACACCGCGGC GTGGAACAGC
TTCAATTCGC CCAAGGGGCG GATGATCGCC AGCTTCCTGG TGTGGACCGA GGAGGGCGGC
CATGCGCTCG CGCTCTCGGC AGACATCCTG CCCGCGTTCC TGAAGAAGTT CTCGATGTAC
GTGCTGCGCA GCAAGGTCAA GCTCGCCGAC GCCAGCGCCG AGGTCGCGCT GATCGGCCTC
GCCGGTCCGC AGGCCGTGGC GATCGCGCAG GCGGCAGGCG CCGCGCTGCC CGCCGAGGAC
ATGCGCCAGG CGGTATCGGC CGCGGGCGTG CGCTGCATCC GCCTCGGCGC GCAGCGCCTG
GTGCTCGCCG TCGCCACCGA CGCCGCCCCG GCGCTGTTCG ACGCGCTCGT CGCCGCCGGC
GCGCTGCGTG CCGGCACCGC GGCCTGGCAG CTCGGCATGA TCCGCGCCGG CCTGGCGCTG
GTCACCGCGC CCACCCAGGA AGAGTTCGTC GCCCAGATGC TCAACTACGA GCTCATCGGC
GGGGTGGACT TCCACAAGGG CTGCTATCCG GGCCAGGAGA TCGTCGCGCG CACCCAGTAC
CTCGGCAAGC TCAAGAAGCG CACCTACCGC CTCGCCCTGC CCGCCGGCAG CACGGCCGCG
CCCGGCACCG ACGTCTATGC GCCCGACTTC GGCGAGCAGT CCGCCGGCAA GCTGGTCAAC
GTCGCACCGA CCGCCGACGG TGGCGTCGAG GCGCTCGCGG TGATCCAGTC GAGCAGCGCG
GAAGCCGGCG AGATCCGTGT CGGCGCGCCC GACGGGCCGC GCGCAGACCT GCTCGACCTG
CCGTATGCGC TCGCCTGA
|
|---|
| Protein sequence | MTAWTEHLAR MGATLDETAR SIAFASPADE ARATETATIA VPLLHLGTIR SQGPDSAAFL
HNLVSNDVKH MEADTAAWNS FNSPKGRMIA SFLVWTEEGG HALALSADIL PAFLKKFSMY
VLRSKVKLAD ASAEVALIGL AGPQAVAIAQ AAGAALPAED MRQAVSAAGV RCIRLGAQRL
VLAVATDAAP ALFDALVAAG ALRAGTAAWQ LGMIRAGLAL VTAPTQEEFV AQMLNYELIG
GVDFHKGCYP GQEIVARTQY LGKLKKRTYR LALPAGSTAA PGTDVYAPDF GEQSAGKLVN
VAPTADGGVE ALAVIQSSSA EAGEIRVGAP DGPRADLLDL PYALA
|
|---|
| |