Gene Tmz1t_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2496 
Symbol 
ID7873935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2698405 
End bp2698938 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content70% 
IMG OID643699418 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002889475 
Protein GI237653161 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0617263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTCG CCCATGCCCT GCTCACCTCG CTGCTCGAAC AACCCTCGTC CGGCTACGAG 
CTCGCACGGC GTTTCGACAA GTCCATCGGC CACTTCTGGC AGGCCACGCA TCAGCAGATC
TACCGCGAGC TCGGCCGCAT GGAGAAGGCG GGGTGGATCC GCTCCGACGC CAACCCCGAC
GCCGGCCGCA CCCGCAAGCG CAGCTACAGC GTGCTGCCCA CCGGGCGCGA CGAGCTGATG
CGCTGGGCCG CCGAGGCCTC GCCCTTGCCC GAGTTGCGCG ACGAGTTCAT GGTCCGCCTG
CGCGCCGACG CGGTCACCGG GCCGCTCGGC CTGCTGCCCG AACTCGATCG CCGTCGCGCG
CTCCACGCCG ACAAGCTGCG CGCCTATCGC GCCATCGAGG CGCGCGACTT TCCCGCCGAG
GTCGAGCCCA CCCGCCAGCG GCGCATCCAC CACCTCATCC TGAAGGCCGG CATCCAGTAC
GAGCAGGGCT GGATCGCCTG GTACGACGAA GCCATCGGCG TGCTGGGGGA ATGA
 
Protein sequence
MSLAHALLTS LLEQPSSGYE LARRFDKSIG HFWQATHQQI YRELGRMEKA GWIRSDANPD 
AGRTRKRSYS VLPTGRDELM RWAAEASPLP ELRDEFMVRL RADAVTGPLG LLPELDRRRA
LHADKLRAYR AIEARDFPAE VEPTRQRRIH HLILKAGIQY EQGWIAWYDE AIGVLGE