| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2487 |
|---|
| Symbol | |
|---|
| ID | 7874170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2687403 |
|---|
| End bp | 2688971 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643699409 |
|---|
| Product | coenzyme A transferase |
|---|
| Protein accession | YP_002889466 |
|---|
| Protein GI | 237653152 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAT CGAAAGTCAT TCCCGCCGCC GAGGCGGGCA AGCTGATCAA GGACGGCGCC
ACGCTGTATT GCAGCGGCGT GGGCCTGGCG GGCTTCGCCG AGGAGGTCGC GATCTCGATC
CGCGAGCGCT TCGAGGCCAC CGGTCATCCG CGCGACATGA CGATCTGGCA CGCCTGCGGG
CTCGGCAACG GCAAGAACAA GGGCATCTTC CACCTCACCC AGCCGGGCAT GATCAAGCGC
ATCGTCGGCG GCCACTTCGG CGTGGGCGGG CCGGTGCTGA TGCAGCTGAT CATGGACAGC
CGCATCGAGG CCTACAATCT GCCGCAGGGC GTGCTGGTGG TGCTGCCGCG CGAGATGGCG
GCAGGCCGCC CCGGGCTGAT CACCAAGGTC GGCCTGGAGA CCTTCGTCGA TCCGCGCATC
GAGGGCGGCA AGCTCAACTC GGCCACCAGC GAGGAGATCG TCGAGCGCGT CGACTTCGAC
GGGCAGGAGT GGCTGTTCTA CCGCGCGCCG CGGATCGACG TCGCGCTGAT CCGCGGCACC
ACCGCCGACG AGAACGGCAA CCTCACGGTC GAGGACGAGG GCATCTTCAA CGAGTCGATC
TCGATCGCCC AGGCCGCGAA GCGCAACGGC GGCATCGTCA TCGCGCAGGT GCTGCAGGTG
GTGCAGAACG GCACCCTGCA TCCGAAGCAG GTCAAGGTGC CGGGCATCCT GGTGGACCAC
GTCGTCGTGG GCCGTCCCGA GAACCACATG CAGACCATGG GCACGCAGTA CAACCGCGCC
TTCGCCGGCG ACATCCGCGT GCCGGTCGGT TCGCTGCGCC GGCTGCCGCT CGACGAACGC
AAGATCATCG CCCGCCGCGC CGCGGTCGAG CTCGGCCACG GCGCGATCGT GAACCTCGGC
ATCGGCGTGC CCGCCGGCAT CGCCTCGATC GCGGCCGAGG AGGGCGTGCA GGACCTCATG
GCCTTGACCC TGGAGACCGG CCCGATCGGC GGCATCCCCG CCGACGGGCT CGACTTCGCC
CACGCCAGCA ACGCCGATGC GACCATCGAC CCGGGCTACC AGTTCGACTT CTACGACGGC
GGCGGCCTCG ACGTGGCCTT CCTCGGGCTC GCCCAGACCG ACGTCCATGG CAACGTGAAT
GTCTCCAAGT TCAGCGGCCG GCCGGTGGGC TGCGGGGGCT TCATCAACAT CACCCAGAAC
GCCAAGAAGG TGGTGTTCTG CGGCGCCTTC ACCGCCGGCG GGCTGGAGAT CCGCGCCGCC
GACGGCCGCC TCGAGATCGT CCGCGAGGGC ACGAGCCGCA AGTTCCTCGA CCACGTCGAG
CAGATCACCT TCAGCGGCCA CTACGCCGCC GGGGTGGGGC AGACGGTGAT GTACGTCACC
GAGCGCGCAG TGTTCCAGCT CACCCGCGAG GGCGGCATGG AACTGCTCGA GGTGGCGCCC
GGCGTCGACA TCGAGCGCGA CATCCTCGCC CACATGGACT TCGTGCCGCG CATGGAGCGC
GTGCGCGAGA TGGACGCCGG CATCTTCAGC GAGCGCTGGG GCCGGCTTTA CGAGATCCTG
CACAGCTGA
|
|---|
| Protein sequence | MSKSKVIPAA EAGKLIKDGA TLYCSGVGLA GFAEEVAISI RERFEATGHP RDMTIWHACG
LGNGKNKGIF HLTQPGMIKR IVGGHFGVGG PVLMQLIMDS RIEAYNLPQG VLVVLPREMA
AGRPGLITKV GLETFVDPRI EGGKLNSATS EEIVERVDFD GQEWLFYRAP RIDVALIRGT
TADENGNLTV EDEGIFNESI SIAQAAKRNG GIVIAQVLQV VQNGTLHPKQ VKVPGILVDH
VVVGRPENHM QTMGTQYNRA FAGDIRVPVG SLRRLPLDER KIIARRAAVE LGHGAIVNLG
IGVPAGIASI AAEEGVQDLM ALTLETGPIG GIPADGLDFA HASNADATID PGYQFDFYDG
GGLDVAFLGL AQTDVHGNVN VSKFSGRPVG CGGFINITQN AKKVVFCGAF TAGGLEIRAA
DGRLEIVREG TSRKFLDHVE QITFSGHYAA GVGQTVMYVT ERAVFQLTRE GGMELLEVAP
GVDIERDILA HMDFVPRMER VREMDAGIFS ERWGRLYEIL HS
|
|---|
| |