| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2435 |
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| Symbol | |
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| ID | 7874119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2622270 |
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| End bp | 2623229 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643699356 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002889415 |
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| Protein GI | 237653101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.267395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA TTGAAGGCAA AGCGATCGCG GTTCGCCACG AACGCATCGA CGAGGCGGCG
GCGGGCCAGC GCATCGACAA CTACCTCCTG CGCATCGCCA AGGGGGTGCC CAAGAGCCAC
GTCTATCGCA TCCTGCGCAG CGGCGAGGTG CGGGTGAACG GGCGTCGCGT GCAGCAGACC
TATCGCCTGC AGGAGGGCGA CGAGGTGCGC ATCCCGCCGA TCCGCATCGC CGAGCCGACC
CACGCCGCAC CCGCGCCGGC GGGCAAGCCG CTGCCGGTGG TGTACGAGGA CGAGGCGCTG
CTCGTCATCG ACAAGCCCTC CGGCAAGGCG GTGCATGGCG GCAGCGGGGT GAGCTATGGG
GTGATCGAGC AGCTGCGCGT GCAGCGCCCC GAGCTACGCA TGCTCGAGCT CGCCCATCGC
CTCGACCGCG AGACCTCGGG GCTGCTGATC GTCGCGAAGA AACGCTCGGC GCTCACCGCG
TTGCACGACA TGATGCGCGA GGGCAGCGTG GAGAAGCGCT ATCTGACCCT GGTGCCGGGG
CGCTGGTCCA ATCCGCTGCA GCACGTCAAG GTTCCGCTGC ACAAGTACCT GACCGCCGAA
GGCGAGCGCC GGGTGCGCGT CGCGGACGAG GGCAAGGCGG CGCACAGCAT CGTGCGCCTG
GTACGGCGCT GGCGCGACTA CAGCCTGCTC GAGGTGGAAC TGAAGACCGG GCGCACGCAT
CAGATCCGCG TGCATCTTGC CCATCTCGGC TTCGCGCTGT GCGGCGACGA CAAATACGGC
GACTTCGCGC TCAACAAGCG CCTGGAGGTC GAGGGCTTGC GGCGGATGTT CCTGCACGCT
GCGAAGCTGC GCCTCGCCCA CCCGCTCACC GGTGCGCCGC TCGCCTTCGA TTCGCCGCTG
CCCGCGGACC TGCAAACCTT CCTCGACCGG CTCGATGCCG CGGAGAAAAA GCATGGCTGA
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| Protein sequence | MTTIEGKAIA VRHERIDEAA AGQRIDNYLL RIAKGVPKSH VYRILRSGEV RVNGRRVQQT
YRLQEGDEVR IPPIRIAEPT HAAPAPAGKP LPVVYEDEAL LVIDKPSGKA VHGGSGVSYG
VIEQLRVQRP ELRMLELAHR LDRETSGLLI VAKKRSALTA LHDMMREGSV EKRYLTLVPG
RWSNPLQHVK VPLHKYLTAE GERRVRVADE GKAAHSIVRL VRRWRDYSLL EVELKTGRTH
QIRVHLAHLG FALCGDDKYG DFALNKRLEV EGLRRMFLHA AKLRLAHPLT GAPLAFDSPL
PADLQTFLDR LDAAEKKHG
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