Gene Tmz1t_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2324 
Symbol 
ID7085311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2613965 
End bp2615200 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID643699345 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_002355959 
Protein GI217970725 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCGTC GTAGAGTCGT CGTCACCGGT CTGGGCGTGA TCTCGCCTGT CGGCAATACT 
GTTACCGAAG CCTGGTCCAA CCTGATCGCC GGCAAGAGCG GCATCGGTCC GATCACCCGT
TTCGACGCGA GCAACTTCGC TGCCCGCATC GCCGGCGAGG TGAAGGACTT CGACGTGTCC
GCCTACCTGT CGCCCAAGGA AGCTCGCCGC ATGGATGTGT TCATCCACTA CGGCATGGCC
GCTGGCATCC AGGCGATCCG CGACTCCGGC ATCGAGGTCA CCGAGGCCAA CGCCGACCGC
ATCGGCATCA ATATCGGTTC GGGGATCGGC GGCCTGCCGA TGATCGAGGA TACGCACAAC
GACTTCCTCG GTGGCGGCCC GCGCAAGATC TCGCCCTTCT TCATTCCGGG CACCATCATC
AACATGATCT CGGGCAACCT CTCGATCATG TTCGGCATGA AGGGGCCCAA CCTCGCGGTG
GTCACCGCCT GCACAACCGG CCTGCACGCG ATCGGCATGG GCGCGCGCAT GATCGGCTAC
GGTGATGCCG ACGTGATGGT GTGCGGTGGC GCGGAATCCA CCGTGACCAA CCTCGCCATT
GGCGGCTTCG GCTCGGCCAA GGCGCTGTCC ACCCGCAACG ACGATCCCGC CACCGCCAGC
CGGCCGTGGG ACAAGGGGCG TGACGGCTTC GTGCTCGGCG AGGGTGCCGG CGTGATGGTG
CTCGAGGAGT ACGAGCACGC CAGGCGCCGG GGCGCGAAGA TCTACGCCGA GGTTGCCGGC
TTCGGCATGA GCGGCGACGC CTACCACATG ACCGCGCCCG ACACCGACGG CCCGCGCCGC
AGCATGGTCA ATGCGATGAA GGACGCCGGC GTGAACGTCG ATCAGGTGCA GTACCTCAAC
GCGCACGGTA CCTCGACCCC GCTCGGCGAC AAGAACGAGA CGGACGCGAT CAAGCTCGCC
TTCGGCGTCG AAGCGGCGAA GCAGCTGGTG GTGAACTCCA CCAAGTCGAT GACCGGTCAC
CTGCTCGGTG GCGCCGGGGG GCTGGAGTCG GTTGTGACCG CGCTGGCGGT GTACCACCAG
ATTTCGCCGC CGACGATCAA CATCTTCGAG CAGGATCCGG AGTGCGACCT CGACTACTGC
GCCAACGTCG CCCGCGAGAT GAAGATCGAC GTGGCCCTGA AGAACAATTT CGGCTTCGGC
GGAACCAACG GCACCCTGGT GTTCCGCCGG GTGTGA
 
Protein sequence
MSRRRVVVTG LGVISPVGNT VTEAWSNLIA GKSGIGPITR FDASNFAARI AGEVKDFDVS 
AYLSPKEARR MDVFIHYGMA AGIQAIRDSG IEVTEANADR IGINIGSGIG GLPMIEDTHN
DFLGGGPRKI SPFFIPGTII NMISGNLSIM FGMKGPNLAV VTACTTGLHA IGMGARMIGY
GDADVMVCGG AESTVTNLAI GGFGSAKALS TRNDDPATAS RPWDKGRDGF VLGEGAGVMV
LEEYEHARRR GAKIYAEVAG FGMSGDAYHM TAPDTDGPRR SMVNAMKDAG VNVDQVQYLN
AHGTSTPLGD KNETDAIKLA FGVEAAKQLV VNSTKSMTGH LLGGAGGLES VVTALAVYHQ
ISPPTINIFE QDPECDLDYC ANVAREMKID VALKNNFGFG GTNGTLVFRR V