Gene Tmz1t_2312 details

Gene Information

• Locus tag: Tmz1t_2312
• Symbol: rnc
• ID: 7085299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 2603513
• End bp: 2604181
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643699333
• Product: ribonuclease III
• Protein accession: YP_002355947
• Protein GI: 217970713
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.842494
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGATC GACTTCAGGC GCGCCTGGGC CACGCGTTCT CCGATGTCCG CCTGCTGCAG 
GAGGCGCTGA CCCATCGCAG CTTCGGGCAG CCCAACAACG AGCGTTTCGA GTTCCTCGGC 
GACGCCGTCC TCGACTGCGT GGTGTCGATC GCGCTGTTTG GCCGCTTCGG CGAGCTGCGC 
GAGGGAGAGC TGTCGCGGGT GCGCGCCTCG CTGGTGCGCC AGGACACGCT GCACCGCCTC 
GCGCTCGAGC TCGAGCTCGG CGACTGCCTG CGCCTGGGCG AGGGCGAGCT CAAGTCCGGC 
GGCAGCCGGC GCCCGTCCAT CCTCGCCGAT GCGCTCGAAG CGCTGTTCGC CGCGGTCTAT 
CTGGACGCCG GCTTCGAAGC GGCGAAGGGG GTCATCGACC GCCTCTACGC ACCGCTGATC 
GCCGAAGTCG ATCCGTGCAA GCCGAGCAAG GACCCCAAGA CCGCGCTGCA GGAATGGCTG 
CAGGCGCGCC GCATTCCGGT GCCGAGCTAC ACCATGGTCG AGATCGTCGG CGAAGCCCAC 
GCGCAGGAGT TCGAGGTCGC CTGCGAAATC CCCAAACTCG CGGTACGCAC GCTGGGCCGC 
GGCCCGAGCC GGCGCATCGC CGAACAACAG TCGGCCGAGC TCGCGCTCGC CGCGGTGAGA 
AAGAAATGA 

 

Protein sequence

MPDRLQARLG HAFSDVRLLQ EALTHRSFGQ PNNERFEFLG DAVLDCVVSI ALFGRFGELR 
EGELSRVRAS LVRQDTLHRL ALELELGDCL RLGEGELKSG GSRRPSILAD ALEALFAAVY 
LDAGFEAAKG VIDRLYAPLI AEVDPCKPSK DPKTALQEWL QARRIPVPSY TMVEIVGEAH 
AQEFEVACEI PKLAVRTLGR GPSRRIAEQQ SAELALAAVR KK